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OPENSEQ.org

GLDA - YIJO
UniProt: P0A9S5 - P32677
Length: 650
Sequences: 633
Seq/Len: 1.07
I_Prob: 0.00

GLDA - Glycerol dehydrogenase
Paralog alert: 0.76 [within 20: 0.07] - ratio of genomes with paralogs
Cluster includes: ADH2 AROB EUTG FUCO GLDA YBDH YQHD
YIJO - Uncharacterized HTH-type transcriptional regulator YijO
Paralog alert: 0.78 [within 20: 0.20] - ratio of genomes with paralogs
Cluster includes: ADIY APPY ARAC CHBR ENVY EUTR FEAR GADW GADX MARA MELR RHAR RHAS SOXS YBCM YDEO YDIP YEAM YIDL YIJO YKGD YPDC YQHC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
346_D 257_R 1.08 0.00
260_L 217_Y 1.07 0.00
34_V 188_R 0.92 0.00
168_G 256_F 0.88 0.00
89_L 94_L 0.88 0.00
46_S 178_I 0.85 0.00
240_L 226_A 0.84 0.00
34_V 243_A 0.82 0.00
346_D 170_L 0.80 0.00
133_D 222_R 0.79 0.00
89_L 166_R 0.79 0.00
35_V 237_V 0.76 0.00
88_I 62_P 0.75 0.00
35_V 86_S 0.75 0.00
53_K 240_V 0.75 0.00
97_L 257_R 0.74 0.00
304_G 134_M 0.74 0.00
88_I 176_D 0.74 0.00
48_V 259_N 0.74 0.00
159_G 256_F 0.73 0.00
114_A 137_Q 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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