| UniProt: | P0ACH5 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11434 | ||
| Length: | 127 (107) | ||
| Sequences: | 20267 | ||
| Seq/Len: | 189.41 |
| MARA
Paralog alert: 0.87 [within 20: 0.43] - ratio of genomes with paralogs Cluster includes: ADIY APPY ARAC CHBR ENVY EUTR FEAR GADW GADX MARA MELR RHAR RHAS SOXS YBCM YDEO YDIP YEAM YIDL YIJO YKGD YPDC YQHC |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 67_A | 100_F | 2.509 | 1.00 | |
| 52_H | 60_S | 2.482 | 1.00 | |
| 75_E | 83_R | 2.344 | 1.00 | |
| 29_E | 39_K | 2.31 | 1.00 | |
| 96_F | 107_Y | 2.247 | 1.00 | |
| 17_W | 21_N | 2.202 | 1.00 | |
| 19_E | 61_R | 2.161 | 1.00 | |
| 65_E | 68_Q | 1.938 | 1.00 | |
| 66_I | 92_L | 1.899 | 1.00 | |
| 60_S | 99_Y | 1.895 | 1.00 | |
| 69_K | 83_R | 1.892 | 1.00 | |
| 63_M | 100_F | 1.88 | 1.00 | |
| 14_I | 42_L | 1.776 | 1.00 | |
| 27_S | 30_K | 1.765 | 1.00 | |
| 21_N | 24_S | 1.739 | 1.00 | |
| 17_W | 34_R | 1.696 | 1.00 | |
| 46_F | 57_Y | 1.616 | 1.00 | |
| 69_K | 84_Y | 1.597 | 1.00 | |
| 75_E | 79_Y | 1.572 | 1.00 | |
| 41_H | 45_M | 1.531 | 1.00 | |
| 69_K | 75_E | 1.519 | 1.00 | |
| 39_K | 43_Q | 1.511 | 1.00 | |
| 102_V | 110_T | 1.476 | 1.00 | |
| 76_P | 79_Y | 1.456 | 1.00 | |
| 18_I | 58_I | 1.416 | 1.00 | |
| 15_L | 50_T | 1.413 | 1.00 | |
| 89_Q | 93_T | 1.399 | 0.99 | |
| 55_G | 59_R | 1.339 | 0.99 | |
| 78_L | 89_Q | 1.321 | 0.99 | |
| 70_L | 77_I | 1.29 | 0.99 | |
| 68_Q | 72_E | 1.289 | 0.99 | |
| 40_W | 44_R | 1.284 | 0.99 | |
| 63_M | 99_Y | 1.28 | 0.99 | |
| 31_V | 54_L | 1.271 | 0.99 | |
| 41_H | 44_R | 1.263 | 0.99 | |
| 22_L | 61_R | 1.25 | 0.99 | |
| 79_Y | 82_E | 1.238 | 0.98 | |
| 52_H | 56_Q | 1.23 | 0.98 | |
| 95_T | 98_N | 1.201 | 0.98 | |
| 105_H | 109_M | 1.199 | 0.98 | |
| 16_D | 20_D | 1.195 | 0.98 | |
| 65_E | 69_K | 1.189 | 0.98 | |
| 91_T | 95_T | 1.189 | 0.98 | |
| 78_L | 82_E | 1.185 | 0.98 | |
| 90_Q | 93_T | 1.171 | 0.98 | |
| 79_Y | 83_R | 1.159 | 0.97 | |
| 14_I | 35_S | 1.159 | 0.97 | |
| 61_R | 64_T | 1.139 | 0.97 | |
| 28_L | 43_Q | 1.128 | 0.97 | |
| 37_Y | 41_H | 1.123 | 0.97 | |
| 59_R | 95_T | 1.123 | 0.97 | |
| 67_A | 107_Y | 1.121 | 0.97 | |
| 102_V | 106_K | 1.118 | 0.96 | |
| 15_L | 19_E | 1.116 | 0.96 | |
| 61_R | 65_E | 1.103 | 0.96 | |
| 59_R | 98_N | 1.065 | 0.95 | |
| 11_I | 50_T | 1.043 | 0.94 | |
| 86_F | 95_T | 1.026 | 0.94 | |
| 66_I | 84_Y | 1.024 | 0.93 | |
| 53_S | 56_Q | 1.008 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1bl0A | 1 | 1 | 100 | 0.118 | Contact Map | 0.799 |
| 3gbgA | 1 | 0.9134 | 99.9 | 0.181 | Contact Map | 0.669 |
| 4fe7A | 1 | 0.9134 | 99.9 | 0.186 | Contact Map | 0.772 |
| 3oioA | 1 | 0.8898 | 99.9 | 0.208 | Contact Map | 0.799 |
| 3oouA | 1 | 0.8504 | 99.9 | 0.211 | Contact Map | 0.818 |
| 3w6vA | 1 | 0.9291 | 99.9 | 0.218 | Contact Map | 0.808 |
| 3mn2A | 2 | 0.8346 | 99.9 | 0.218 | Contact Map | 0.807 |
| 2k9sA | 1 | 0.8346 | 99.9 | 0.227 | Contact Map | 0.578 |
| 3lsgA | 5 | 0.8031 | 99.9 | 0.234 | Contact Map | 0.918 |
| 3mklA | 2 | 0.9449 | 99.9 | 0.237 | Contact Map | 0.843 |
Sequence Conservation (Image Generated using WebLogo v3)