| UniProt: | P0A9E2 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10958 | ||
| Length: | 107 (103) | ||
| Sequences: | 21949 | ||
| Seq/Len: | 213.10 |
| SOXS
Paralog alert: 0.87 [within 20: 0.44] - ratio of genomes with paralogs Cluster includes: ADIY APPY ARAC CHBR ENVY EUTR FEAR GADW GADX MARA MELR RHAR RHAS SOXS YBCM YDEO YDIP YEAM YIDL YIJO YKGD YPDC YQHC |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 48_Q | 56_Q | 2.435 | 1.00 | |
| 63_A | 96_F | 2.409 | 1.00 | |
| 71_R | 79_D | 2.326 | 1.00 | |
| 25_D | 35_K | 2.273 | 1.00 | |
| 92_F | 103_Y | 2.119 | 1.00 | |
| 13_W | 17_H | 2.106 | 1.00 | |
| 15_D | 57_R | 2.083 | 1.00 | |
| 65_E | 79_D | 1.91 | 1.00 | |
| 62_A | 88_F | 1.894 | 1.00 | |
| 61_L | 64_V | 1.874 | 1.00 | |
| 59_L | 96_F | 1.869 | 1.00 | |
| 56_Q | 95_Q | 1.861 | 1.00 | |
| 23_N | 26_V | 1.747 | 1.00 | |
| 10_L | 38_L | 1.734 | 1.00 | |
| 17_H | 20_Q | 1.687 | 1.00 | |
| 65_E | 80_L | 1.662 | 1.00 | |
| 13_W | 30_K | 1.636 | 1.00 | |
| 42_F | 53_Y | 1.576 | 1.00 | |
| 71_R | 75_D | 1.533 | 1.00 | |
| 37_Y | 41_M | 1.511 | 1.00 | |
| 65_E | 71_R | 1.509 | 1.00 | |
| 72_P | 75_D | 1.464 | 1.00 | |
| 35_K | 39_Q | 1.439 | 1.00 | |
| 85_Q | 89_S | 1.396 | 0.99 | |
| 51_G | 55_R | 1.366 | 0.99 | |
| 98_R | 106_R | 1.361 | 0.99 | |
| 14_I | 54_I | 1.317 | 0.99 | |
| 11_I | 46_T | 1.309 | 0.99 | |
| 74_F | 85_Q | 1.301 | 0.99 | |
| 64_V | 68_T | 1.278 | 0.99 | |
| 27_V | 50_L | 1.274 | 0.99 | |
| 66_L | 73_I | 1.257 | 0.99 | |
| 59_L | 95_Q | 1.257 | 0.99 | |
| 74_F | 78_M | 1.241 | 0.98 | |
| 36_W | 40_R | 1.229 | 0.98 | |
| 61_L | 65_E | 1.212 | 0.98 | |
| 48_Q | 52_D | 1.206 | 0.98 | |
| 87_T | 91_V | 1.196 | 0.98 | |
| 75_D | 78_M | 1.196 | 0.98 | |
| 101_S | 105_H | 1.188 | 0.98 | |
| 37_Y | 40_R | 1.186 | 0.98 | |
| 18_I | 57_R | 1.175 | 0.98 | |
| 12_A | 16_E | 1.166 | 0.97 | |
| 55_R | 91_V | 1.148 | 0.97 | |
| 11_I | 15_D | 1.147 | 0.97 | |
| 33_Y | 37_Y | 1.144 | 0.97 | |
| 91_V | 94_R | 1.143 | 0.97 | |
| 63_A | 103_Y | 1.13 | 0.97 | |
| 86_Q | 89_S | 1.129 | 0.97 | |
| 57_R | 60_L | 1.118 | 0.96 | |
| 10_L | 31_S | 1.115 | 0.96 | |
| 75_D | 79_D | 1.105 | 0.96 | |
| 24_I | 39_Q | 1.08 | 0.95 | |
| 57_R | 61_L | 1.077 | 0.95 | |
| 98_R | 102_D | 1.076 | 0.95 | |
| 55_R | 94_R | 1.059 | 0.95 | |
| 82_Y | 91_V | 1.036 | 0.94 | |
| 7_I | 46_T | 1.025 | 0.93 | |
| 13_W | 22_L | 1.001 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3gbgA | 1 | 0.9907 | 99.9 | 0.001 | Contact Map | 0.664 |
| 4fe7A | 1 | 1 | 99.9 | 0.012 | Contact Map | 0.768 |
| 1bl0A | 1 | 1 | 99.9 | 0.041 | Contact Map | 0.784 |
| 3w6vA | 1 | 1 | 99.9 | 0.044 | Contact Map | 0.806 |
| 3oioA | 1 | 1 | 99.9 | 0.044 | Contact Map | 0.795 |
| 3oouA | 1 | 1 | 99.9 | 0.047 | Contact Map | 0.813 |
| 3mn2A | 2 | 0.972 | 99.9 | 0.052 | Contact Map | 0.802 |
| 2k9sA | 1 | 0.9813 | 99.9 | 0.062 | Contact Map | 0.57 |
| 3mklA | 2 | 0.9907 | 99.9 | 0.067 | Contact Map | 0.841 |
| 3lsgA | 5 | 0.9533 | 99.9 | 0.073 | Contact Map | 0.916 |
Sequence Conservation (Image Generated using WebLogo v3)