| UniProt: | P37640 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12246 | ||
| Length: | 200 (197) | ||
| Sequences: | 30859 | ||
| Seq/Len: | 156.64 |
| YHJB
Paralog alert: 0.94 [within 20: 0.58] - ratio of genomes with paralogs Cluster includes: ARCA BAER BASR BGLJ CPXR CREB CSGD CUSR DCUR DPIA EVGA FIMZ KDPE NARL NARP OMPR PHOB PHOP QSEB RCSB RSTA TORR UHPA UVRY YEDW YGEK YHJB |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 13_I | 31_G | 3.183 | 1.00 | |
| 13_I | 33_S | 2.971 | 1.00 | |
| 36_D | 58_G | 2.678 | 1.00 | |
| 34_Q | 58_G | 2.498 | 1.00 | |
| 6_F | 38_L | 2.448 | 1.00 | |
| 59_E | 67_K | 2.39 | 1.00 | |
| 145_R | 148_E | 2.345 | 1.00 | |
| 171_G | 174_K | 2.277 | 1.00 | |
| 89_L | 109_T | 2.277 | 1.00 | |
| 159_N | 174_K | 2.266 | 1.00 | |
| 86_K | 106_T | 2.252 | 1.00 | |
| 30_Q | 47_E | 2.237 | 1.00 | |
| 17_K | 21_Q | 2.219 | 1.00 | |
| 35_A | 59_E | 2.196 | 1.00 | |
| 146_Q | 183_R | 2.157 | 1.00 | |
| 34_Q | 37_E | 2.085 | 1.00 | |
| 19_S | 107_V | 2.078 | 1.00 | |
| 39_W | 67_K | 2.056 | 1.00 | |
| 43_E | 71_Q | 2.016 | 1.00 | |
| 2_Q | 28_S | 1.995 | 1.00 | |
| 17_K | 31_G | 1.952 | 1.00 | |
| 60_F | 63_W | 1.91 | 1.00 | |
| 33_S | 37_E | 1.836 | 1.00 | |
| 151_T | 155_A | 1.828 | 1.00 | |
| 176_H | 179_S | 1.806 | 1.00 | |
| 2_Q | 30_Q | 1.794 | 1.00 | |
| 52_L | 64_L | 1.729 | 1.00 | |
| 20_L | 114_V | 1.725 | 1.00 | |
| 65_L | 77_V | 1.715 | 1.00 | |
| 79_I | 92_V | 1.708 | 1.00 | |
| 49_L | 114_V | 1.696 | 1.00 | |
| 78_L | 117_A | 1.649 | 1.00 | |
| 55_D | 83_D | 1.624 | 1.00 | |
| 94_H | 115_N | 1.612 | 1.00 | |
| 54_G | 79_I | 1.593 | 1.00 | |
| 52_L | 65_L | 1.563 | 1.00 | |
| 158_S | 161_E | 1.52 | 1.00 | |
| 79_I | 97_V | 1.518 | 1.00 | |
| 67_K | 70_V | 1.505 | 1.00 | |
| 65_L | 79_I | 1.499 | 1.00 | |
| 98_L | 120_G | 1.488 | 1.00 | |
| 152_M | 165_A | 1.487 | 1.00 | |
| 186_V | 195_M | 1.473 | 1.00 | |
| 152_M | 162_I | 1.464 | 1.00 | |
| 35_A | 64_L | 1.458 | 1.00 | |
| 83_D | 88_W | 1.456 | 1.00 | |
| 59_E | 63_W | 1.452 | 1.00 | |
| 7_D | 13_I | 1.448 | 1.00 | |
| 50_V | 75_V | 1.416 | 1.00 | |
| 39_W | 64_L | 1.413 | 1.00 | |
| 69_V | 98_L | 1.395 | 0.99 | |
| 6_F | 56_Q | 1.392 | 0.99 | |
| 30_Q | 41_K | 1.377 | 0.99 | |
| 99_A | 113_A | 1.349 | 0.99 | |
| 41_K | 45_Y | 1.322 | 0.99 | |
| 62_Y | 95_F | 1.298 | 0.99 | |
| 4_V | 32_A | 1.288 | 0.99 | |
| 63_W | 66_Q | 1.283 | 0.99 | |
| 32_A | 41_K | 1.278 | 0.99 | |
| 36_D | 59_E | 1.277 | 0.99 | |
| 40_Q | 44_S | 1.265 | 0.99 | |
| 157_E | 165_A | 1.261 | 0.99 | |
| 54_G | 62_Y | 1.25 | 0.99 | |
| 67_K | 71_Q | 1.249 | 0.99 | |
| 10_S | 33_S | 1.243 | 0.98 | |
| 150_L | 192_A | 1.239 | 0.98 | |
| 41_K | 44_S | 1.232 | 0.98 | |
| 39_W | 59_E | 1.215 | 0.98 | |
| 25_P | 111_A | 1.205 | 0.98 | |
| 85_N | 88_W | 1.199 | 0.98 | |
| 36_D | 40_Q | 1.193 | 0.98 | |
| 42_L | 68_T | 1.191 | 0.98 | |
| 131_T | 135_D | 1.19 | 0.98 | |
| 175_A | 178_E | 1.189 | 0.98 | |
| 27_V | 115_N | 1.188 | 0.98 | |
| 66_Q | 91_E | 1.172 | 0.98 | |
| 172_T | 176_H | 1.166 | 0.97 | |
| 177_L | 181_Y | 1.159 | 0.97 | |
| 160_K | 170_T | 1.157 | 0.97 | |
| 8_R | 53_D | 1.149 | 0.97 | |
| 143_S | 183_R | 1.137 | 0.97 | |
| 49_L | 118_A | 1.122 | 0.97 | |
| 13_I | 32_A | 1.12 | 0.96 | |
| 30_Q | 45_Y | 1.119 | 0.96 | |
| 26_G | 115_N | 1.113 | 0.96 | |
| 37_E | 40_Q | 1.106 | 0.96 | |
| 87_R | 91_E | 1.101 | 0.96 | |
| 16_M | 80_T | 1.078 | 0.95 | |
| 160_K | 164_R | 1.075 | 0.95 | |
| 37_E | 41_K | 1.073 | 0.95 | |
| 38_L | 42_L | 1.07 | 0.95 | |
| 4_V | 38_L | 1.059 | 0.95 | |
| 62_Y | 91_E | 1.057 | 0.95 | |
| 148_E | 151_T | 1.049 | 0.94 | |
| 6_F | 50_V | 1.045 | 0.94 | |
| 41_K | 47_E | 1.029 | 0.94 | |
| 55_D | 82_T | 1.026 | 0.94 | |
| 56_Q | 64_L | 1.024 | 0.93 | |
| 3_I | 27_V | 1.017 | 0.93 | |
| 117_A | 120_G | 1.01 | 0.93 | |
| 147_R | 151_T | 1.008 | 0.93 | |
| 152_M | 156_G | 1.008 | 0.93 | |
| 5_M | 29_I | 1.007 | 0.93 | |
| 90_Q | 108_E | 1.002 | 0.92 | |
| 116_S | 121_M | 1.001 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3c3wA | 2 | 0.995 | 100 | 0.07 | Contact Map | 0.601 |
| 4gvpA | 4 | 0.995 | 100 | 0.072 | Contact Map | 0.777 |
| 4hyeA | 2 | 0.98 | 100 | 0.091 | Contact Map | 0.801 |
| 1a04A | 2 | 0.995 | 100 | 0.1 | Contact Map | 0.655 |
| 1yioA | 1 | 0.985 | 100 | 0.116 | Contact Map | 0.676 |
| 3kloA | 4 | 0.995 | 100 | 0.121 | Contact Map | 0.452 |
| 1ys7A | 2 | 0.99 | 100 | 0.154 | Contact Map | 0.752 |
| 4b09A | 12 | 0.985 | 100 | 0.165 | Contact Map | 0.631 |
| 3q9sA | 1 | 0.98 | 100 | 0.175 | Contact Map | 0.654 |
| 1kgsA | 1 | 0.99 | 100 | 0.184 | Contact Map | 0.68 |
Sequence Conservation (Image Generated using WebLogo v3)