| UniProt: | P30843 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11615 | ||
| Length: | 222 (217) | ||
| Sequences: | 31205 | ||
| Seq/Len: | 143.80 |
| BASR
Paralog alert: 0.93 [within 20: 0.58] - ratio of genomes with paralogs Cluster includes: ARCA BAER BASR BGLJ CPXR CREB CSGD CUSR DCUR DPIA EVGA FIMZ KDPE NARL NARP OMPR PHOB PHOP QSEB RCSB RSTA TORR UHPA UVRY YEDW YGEK YHJB |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 13_L | 29_S | 3.567 | 1.00 | |
| 13_L | 31_T | 2.882 | 1.00 | |
| 17_I | 29_S | 2.636 | 1.00 | |
| 34_R | 56_D | 2.523 | 1.00 | |
| 32_T | 56_D | 2.436 | 1.00 | |
| 28_D | 45_Y | 2.435 | 1.00 | |
| 6_V | 36_A | 2.428 | 1.00 | |
| 33_A | 57_E | 2.284 | 1.00 | |
| 57_E | 65_R | 2.271 | 1.00 | |
| 153_K | 156_A | 2.212 | 1.00 | |
| 154_E | 200_K | 2.196 | 1.00 | |
| 17_I | 21_Q | 2.182 | 1.00 | |
| 188_N | 191_E | 2.173 | 1.00 | |
| 32_T | 35_M | 2.145 | 1.00 | |
| 171_R | 191_E | 2.114 | 1.00 | |
| 37_E | 65_R | 2.081 | 1.00 | |
| 84_L | 104_A | 2.073 | 1.00 | |
| 58_D | 61_H | 2.038 | 1.00 | |
| 41_E | 69_K | 2.037 | 1.00 | |
| 19_A | 105_L | 1.994 | 1.00 | |
| 2_K | 26_A | 1.952 | 1.00 | |
| 31_T | 35_M | 1.901 | 1.00 | |
| 87_K | 107_E | 1.868 | 1.00 | |
| 207_R | 217_V | 1.795 | 1.00 | |
| 131_N | 144_G | 1.778 | 1.00 | |
| 4_L | 30_V | 1.776 | 1.00 | |
| 30_V | 39_S | 1.768 | 1.00 | |
| 159_S | 163_L | 1.745 | 1.00 | |
| 50_L | 62_F | 1.741 | 1.00 | |
| 2_K | 28_D | 1.731 | 1.00 | |
| 207_R | 215_M | 1.73 | 1.00 | |
| 47_L | 112_I | 1.689 | 1.00 | |
| 128_I | 133_T | 1.686 | 1.00 | |
| 140_Q | 147_E | 1.672 | 1.00 | |
| 77_I | 90_G | 1.653 | 1.00 | |
| 20_A | 112_I | 1.648 | 1.00 | |
| 53_G | 81_R | 1.645 | 1.00 | |
| 63_L | 75_V | 1.637 | 1.00 | |
| 65_R | 68_Q | 1.625 | 1.00 | |
| 133_T | 142_W | 1.611 | 1.00 | |
| 28_D | 39_S | 1.579 | 1.00 | |
| 193_H | 196_N | 1.573 | 1.00 | |
| 50_L | 63_L | 1.572 | 1.00 | |
| 92_D | 113_R | 1.562 | 1.00 | |
| 96_D | 118_R | 1.548 | 1.00 | |
| 76_L | 115_L | 1.545 | 1.00 | |
| 134_L | 162_M | 1.538 | 1.00 | |
| 23_E | 109_H | 1.529 | 1.00 | |
| 6_V | 54_L | 1.501 | 1.00 | |
| 63_L | 77_I | 1.49 | 1.00 | |
| 52_L | 77_I | 1.489 | 1.00 | |
| 170_H | 173_I | 1.465 | 1.00 | |
| 164_K | 167_S | 1.445 | 1.00 | |
| 57_E | 61_H | 1.441 | 1.00 | |
| 48_V | 73_L | 1.44 | 1.00 | |
| 33_A | 62_F | 1.431 | 1.00 | |
| 160_R | 177_D | 1.412 | 1.00 | |
| 65_R | 69_K | 1.411 | 1.00 | |
| 37_E | 62_F | 1.408 | 1.00 | |
| 160_R | 174_L | 1.398 | 0.99 | |
| 81_R | 86_D | 1.37 | 0.99 | |
| 7_E | 13_L | 1.366 | 0.99 | |
| 77_I | 95_A | 1.358 | 0.99 | |
| 169_V | 177_D | 1.332 | 0.99 | |
| 61_H | 64_A | 1.322 | 0.99 | |
| 28_D | 43_G | 1.322 | 0.99 | |
| 25_Y | 113_R | 1.319 | 0.99 | |
| 38_Q | 42_A | 1.31 | 0.99 | |
| 39_S | 43_G | 1.299 | 0.99 | |
| 67_R | 96_D | 1.296 | 0.99 | |
| 194_I | 198_R | 1.278 | 0.99 | |
| 64_A | 93_V | 1.265 | 0.99 | |
| 39_S | 42_A | 1.254 | 0.99 | |
| 60_L | 93_V | 1.23 | 0.98 | |
| 3_I | 25_Y | 1.22 | 0.98 | |
| 30_V | 36_A | 1.219 | 0.98 | |
| 34_R | 38_Q | 1.214 | 0.98 | |
| 52_L | 60_L | 1.213 | 0.98 | |
| 34_R | 57_E | 1.208 | 0.98 | |
| 40_L | 66_I | 1.204 | 0.98 | |
| 135_N | 138_R | 1.202 | 0.98 | |
| 165_A | 169_V | 1.193 | 0.98 | |
| 37_E | 57_E | 1.19 | 0.98 | |
| 47_L | 116_L | 1.187 | 0.98 | |
| 209_V | 215_M | 1.182 | 0.98 | |
| 97_D | 111_R | 1.179 | 0.98 | |
| 64_A | 89_A | 1.15 | 0.97 | |
| 10_T | 31_T | 1.133 | 0.97 | |
| 8_D | 51_D | 1.122 | 0.97 | |
| 83_T | 86_D | 1.115 | 0.96 | |
| 139_R | 212_F | 1.114 | 0.96 | |
| 35_M | 38_Q | 1.108 | 0.96 | |
| 84_L | 88_I | 1.1 | 0.96 | |
| 160_R | 169_V | 1.079 | 0.95 | |
| 24_G | 113_R | 1.078 | 0.95 | |
| 60_L | 89_A | 1.077 | 0.95 | |
| 35_M | 39_S | 1.074 | 0.95 | |
| 70_K | 73_L | 1.067 | 0.95 | |
| 189_T | 193_H | 1.064 | 0.95 | |
| 6_V | 48_V | 1.062 | 0.95 | |
| 39_S | 45_Y | 1.06 | 0.95 | |
| 16_L | 78_L | 1.059 | 0.95 | |
| 136_M | 159_S | 1.04 | 0.94 | |
| 139_R | 156_A | 1.037 | 0.94 | |
| 167_S | 173_I | 1.037 | 0.94 | |
| 85_T | 89_A | 1.032 | 0.94 | |
| 5_I | 27_C | 1.03 | 0.94 | |
| 4_L | 45_Y | 1.029 | 0.94 | |
| 4_L | 36_A | 1.029 | 0.94 | |
| 126_E | 133_T | 1.025 | 0.93 | |
| 151_T | 200_K | 1.024 | 0.93 | |
| 89_A | 93_V | 1.02 | 0.93 | |
| 60_L | 90_G | 1.015 | 0.93 | |
| 172_E | 187_T | 1.014 | 0.93 | |
| 48_V | 66_I | 1.011 | 0.93 | |
| 36_A | 40_L | 1.006 | 0.93 | |
| 134_L | 155_Y | 1.001 | 0.92 | |
| 172_E | 176_N | 1 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2gwrA | 1 | 0.9955 | 100 | 0.14 | Contact Map | 0.696 |
| 3r0jA | 2 | 0.991 | 100 | 0.143 | Contact Map | 0.676 |
| 1ys7A | 2 | 0.9865 | 100 | 0.149 | Contact Map | 0.791 |
| 1kgsA | 1 | 0.9865 | 100 | 0.171 | Contact Map | 0.718 |
| 2oqrA | 1 | 0.9775 | 100 | 0.172 | Contact Map | 0.57 |
| 4b09A | 12 | 0.9955 | 100 | 0.183 | Contact Map | 0.671 |
| 2hqrA | 2 | 0.9685 | 100 | 0.185 | Contact Map | 0.691 |
| 1p2fA | 1 | 0.9595 | 100 | 0.202 | Contact Map | 0.748 |
| 3q9sA | 1 | 0.9369 | 100 | 0.22 | Contact Map | 0.696 |
| 3c3wA | 2 | 0.9459 | 100 | 0.279 | Contact Map | 0.627 |
Sequence Conservation (Image Generated using WebLogo v3)