| UniProt: | P31802 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11527 | ||
| Length: | 215 (202) | ||
| Sequences: | 29934 | ||
| Seq/Len: | 148.19 |
| NARP
Paralog alert: 0.94 [within 20: 0.58] - ratio of genomes with paralogs Cluster includes: ARCA BAER BASR BGLJ CPXR CREB CSGD CUSR DCUR DPIA EVGA FIMZ KDPE NARL NARP OMPR PHOB PHOP QSEB RCSB RSTA TORR UHPA UVRY YEDW YGEK YHJB |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 19_R | 37_E | 3.574 | 1.00 | |
| 19_R | 39_G | 2.891 | 1.00 | |
| 42_A | 64_G | 2.598 | 1.00 | |
| 23_R | 37_E | 2.595 | 1.00 | |
| 183_Q | 186_K | 2.465 | 1.00 | |
| 12_V | 44_A | 2.452 | 1.00 | |
| 40_D | 64_G | 2.405 | 1.00 | |
| 157_R | 160_D | 2.381 | 1.00 | |
| 65_M | 73_A | 2.325 | 1.00 | |
| 92_S | 112_D | 2.259 | 1.00 | |
| 23_R | 27_E | 2.224 | 1.00 | |
| 36_A | 53_I | 2.216 | 1.00 | |
| 158_E | 195_K | 2.213 | 1.00 | |
| 41_G | 65_M | 2.184 | 1.00 | |
| 95_V | 115_V | 2.16 | 1.00 | |
| 171_N | 186_K | 2.126 | 1.00 | |
| 25_L | 113_P | 2.056 | 1.00 | |
| 40_D | 43_S | 2.044 | 1.00 | |
| 45_I | 73_A | 1.981 | 1.00 | |
| 8_Q | 33_E | 1.915 | 1.00 | |
| 49_N | 77_D | 1.888 | 1.00 | |
| 66_S | 69_D | 1.888 | 1.00 | |
| 188_H | 191_N | 1.842 | 1.00 | |
| 39_G | 43_S | 1.813 | 1.00 | |
| 38_A | 47_L | 1.806 | 1.00 | |
| 163_H | 167_Q | 1.801 | 1.00 | |
| 71_L | 83_I | 1.716 | 1.00 | |
| 84_I | 123_G | 1.71 | 1.00 | |
| 55_V | 120_I | 1.709 | 1.00 | |
| 26_L | 120_I | 1.707 | 1.00 | |
| 85_I | 98_L | 1.696 | 1.00 | |
| 8_Q | 36_A | 1.658 | 1.00 | |
| 58_L | 70_T | 1.655 | 1.00 | |
| 170_S | 173_Q | 1.654 | 1.00 | |
| 61_N | 89_S | 1.642 | 1.00 | |
| 60_L | 85_I | 1.618 | 1.00 | |
| 100_D | 121_R | 1.614 | 1.00 | |
| 104_D | 126_G | 1.581 | 1.00 | |
| 36_A | 47_L | 1.58 | 1.00 | |
| 58_L | 71_L | 1.562 | 1.00 | |
| 29_D | 117_L | 1.537 | 1.00 | |
| 36_A | 51_L | 1.527 | 1.00 | |
| 71_L | 85_I | 1.525 | 1.00 | |
| 10_M | 38_A | 1.521 | 1.00 | |
| 145_G | 150_P | 1.517 | 1.00 | |
| 85_I | 103_A | 1.479 | 1.00 | |
| 73_A | 76_R | 1.465 | 1.00 | |
| 89_S | 94_D | 1.452 | 1.00 | |
| 13_D | 19_R | 1.444 | 1.00 | |
| 56_I | 81_A | 1.434 | 1.00 | |
| 12_V | 62_M | 1.425 | 1.00 | |
| 65_M | 69_D | 1.41 | 1.00 | |
| 164_E | 174_I | 1.409 | 1.00 | |
| 41_G | 70_T | 1.401 | 0.99 | |
| 75_R | 104_D | 1.362 | 0.99 | |
| 45_I | 70_T | 1.358 | 0.99 | |
| 105_G | 119_A | 1.347 | 0.99 | |
| 68_L | 101_A | 1.329 | 0.99 | |
| 144_F | 160_D | 1.297 | 0.99 | |
| 169_L | 177_V | 1.296 | 0.99 | |
| 164_E | 177_V | 1.267 | 0.99 | |
| 47_L | 51_L | 1.257 | 0.99 | |
| 60_L | 68_L | 1.257 | 0.99 | |
| 42_A | 65_M | 1.257 | 0.99 | |
| 162_L | 204_A | 1.251 | 0.99 | |
| 171_N | 175_A | 1.244 | 0.98 | |
| 69_D | 72_N | 1.235 | 0.98 | |
| 46_D | 50_R | 1.234 | 0.98 | |
| 73_A | 77_D | 1.234 | 0.98 | |
| 184_T | 188_H | 1.209 | 0.98 | |
| 47_L | 50_R | 1.203 | 0.98 | |
| 32_S | 121_R | 1.201 | 0.98 | |
| 189_I | 193_L | 1.192 | 0.98 | |
| 187_V | 190_R | 1.19 | 0.98 | |
| 45_I | 65_M | 1.182 | 0.98 | |
| 198_V | 207_L | 1.179 | 0.98 | |
| 31_G | 121_R | 1.178 | 0.98 | |
| 42_A | 46_D | 1.174 | 0.98 | |
| 38_A | 44_A | 1.174 | 0.98 | |
| 48_A | 74_L | 1.166 | 0.97 | |
| 16_P | 39_G | 1.157 | 0.97 | |
| 91_A | 94_D | 1.152 | 0.97 | |
| 155_T | 195_K | 1.148 | 0.97 | |
| 140_E | 143_M | 1.141 | 0.97 | |
| 29_D | 121_R | 1.129 | 0.97 | |
| 72_N | 97_A | 1.124 | 0.97 | |
| 14_D | 59_D | 1.121 | 0.97 | |
| 141_R | 163_H | 1.111 | 0.96 | |
| 55_V | 124_A | 1.108 | 0.96 | |
| 43_S | 46_D | 1.096 | 0.96 | |
| 9_V | 32_S | 1.094 | 0.96 | |
| 62_M | 70_T | 1.084 | 0.96 | |
| 44_A | 48_A | 1.078 | 0.95 | |
| 93_S | 97_A | 1.073 | 0.95 | |
| 160_D | 163_H | 1.057 | 0.95 | |
| 123_G | 126_G | 1.055 | 0.95 | |
| 22_V | 86_L | 1.046 | 0.94 | |
| 68_L | 97_A | 1.036 | 0.94 | |
| 43_S | 47_L | 1.035 | 0.94 | |
| 183_Q | 187_V | 1.024 | 0.93 | |
| 164_E | 169_L | 1.017 | 0.93 | |
| 172_K | 176_S | 1.013 | 0.93 | |
| 12_V | 56_I | 1.01 | 0.93 | |
| 22_V | 116_L | 1.009 | 0.93 | |
| 137_Y | 147_E | 1.003 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3c3wA | 2 | 0.9721 | 100 | 0.148 | Contact Map | 0.595 |
| 4gvpA | 4 | 0.9628 | 100 | 0.161 | Contact Map | 0.782 |
| 1a04A | 2 | 0.9907 | 100 | 0.162 | Contact Map | 0.685 |
| 4hyeA | 2 | 0.9535 | 100 | 0.174 | Contact Map | 0.819 |
| 3kloA | 4 | 1 | 100 | 0.184 | Contact Map | 0.427 |
| 1yioA | 1 | 0.9442 | 100 | 0.216 | Contact Map | 0.689 |
| 4b09A | 12 | 0.986 | 100 | 0.216 | Contact Map | 0.66 |
| 1ys7A | 2 | 0.9814 | 100 | 0.222 | Contact Map | 0.783 |
| 3q9sA | 1 | 0.9628 | 100 | 0.228 | Contact Map | 0.693 |
| 1p2fA | 1 | 0.9535 | 100 | 0.237 | Contact Map | 0.765 |
Sequence Conservation (Image Generated using WebLogo v3)