| UniProt: | P0AED5 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11140 | ||
| Length: | 218 (210) | ||
| Sequences: | 30431 | ||
| Seq/Len: | 144.91 |
| UVRY
Paralog alert: 0.94 [within 20: 0.58] - ratio of genomes with paralogs Cluster includes: ARCA BAER BASR BGLJ CPXR CREB CSGD CUSR DCUR DPIA EVGA FIMZ KDPE NARL NARP OMPR PHOB PHOP QSEB RCSB RSTA TORR UHPA UVRY YEDW YGEK YHJB |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 14_R | 32_E | 3.64 | 1.00 | |
| 14_R | 34_S | 2.925 | 1.00 | |
| 18_R | 32_E | 2.665 | 1.00 | |
| 37_E | 59_G | 2.644 | 1.00 | |
| 7_V | 39_A | 2.481 | 1.00 | |
| 35_C | 59_G | 2.461 | 1.00 | |
| 167_V | 182_N | 2.372 | 1.00 | |
| 179_K | 182_N | 2.367 | 1.00 | |
| 60_I | 68_K | 2.346 | 1.00 | |
| 153_R | 156_Q | 2.344 | 1.00 | |
| 87_N | 107_A | 2.299 | 1.00 | |
| 18_R | 22_E | 2.262 | 1.00 | |
| 90_P | 110_E | 2.25 | 1.00 | |
| 36_G | 60_I | 2.232 | 1.00 | |
| 154_E | 191_K | 2.156 | 1.00 | |
| 30_V | 48_V | 2.095 | 1.00 | |
| 35_C | 38_D | 2.08 | 1.00 | |
| 20_I | 108_P | 2.059 | 1.00 | |
| 44_R | 72_S | 2.052 | 1.00 | |
| 40_V | 68_K | 2.018 | 1.00 | |
| 3_N | 28_K | 1.954 | 1.00 | |
| 61_G | 64_E | 1.896 | 1.00 | |
| 184_Y | 187_R | 1.877 | 1.00 | |
| 34_S | 38_D | 1.837 | 1.00 | |
| 159_L | 163_K | 1.836 | 1.00 | |
| 33_A | 42_W | 1.83 | 1.00 | |
| 80_M | 93_V | 1.728 | 1.00 | |
| 50_V | 115_I | 1.72 | 1.00 | |
| 3_N | 30_V | 1.718 | 1.00 | |
| 66_T | 78_I | 1.714 | 1.00 | |
| 21_L | 115_I | 1.709 | 1.00 | |
| 79_I | 118_V | 1.696 | 1.00 | |
| 53_M | 65_A | 1.682 | 1.00 | |
| 55_M | 80_M | 1.65 | 1.00 | |
| 95_Q | 116_R | 1.641 | 1.00 | |
| 56_S | 84_H | 1.622 | 1.00 | |
| 160_M | 170_I | 1.603 | 1.00 | |
| 99_A | 121_G | 1.584 | 1.00 | |
| 160_M | 173_Q | 1.582 | 1.00 | |
| 53_M | 66_T | 1.565 | 1.00 | |
| 66_T | 80_M | 1.563 | 1.00 | |
| 5_L | 33_A | 1.556 | 1.00 | |
| 80_M | 98_A | 1.546 | 1.00 | |
| 166_K | 169_E | 1.523 | 1.00 | |
| 68_K | 71_R | 1.517 | 1.00 | |
| 8_D | 14_R | 1.466 | 1.00 | |
| 60_I | 64_E | 1.452 | 1.00 | |
| 7_V | 57_M | 1.448 | 1.00 | |
| 84_H | 89_L | 1.44 | 1.00 | |
| 36_G | 65_A | 1.429 | 1.00 | |
| 70_A | 99_A | 1.405 | 0.99 | |
| 51_V | 76_V | 1.402 | 0.99 | |
| 165_Q | 173_Q | 1.388 | 0.99 | |
| 40_V | 65_A | 1.387 | 0.99 | |
| 100_G | 114_A | 1.379 | 0.99 | |
| 194_I | 203_L | 1.375 | 0.99 | |
| 63_L | 96_A | 1.345 | 0.99 | |
| 30_V | 42_W | 1.33 | 0.99 | |
| 42_W | 46_N | 1.283 | 0.99 | |
| 136_S | 139_E | 1.279 | 0.99 | |
| 160_M | 165_Q | 1.278 | 0.99 | |
| 64_E | 67_R | 1.272 | 0.99 | |
| 37_E | 60_I | 1.267 | 0.99 | |
| 68_K | 72_S | 1.264 | 0.99 | |
| 55_M | 63_L | 1.263 | 0.99 | |
| 42_W | 45_T | 1.249 | 0.99 | |
| 41_K | 45_T | 1.247 | 0.99 | |
| 86_E | 89_L | 1.218 | 0.98 | |
| 180_T | 184_Y | 1.213 | 0.98 | |
| 25_K | 112_V | 1.206 | 0.98 | |
| 37_E | 41_K | 1.204 | 0.98 | |
| 26_G | 116_R | 1.203 | 0.98 | |
| 33_A | 39_A | 1.193 | 0.98 | |
| 40_V | 60_I | 1.192 | 0.98 | |
| 43_C | 69_I | 1.185 | 0.98 | |
| 27_I | 116_R | 1.183 | 0.98 | |
| 151_S | 191_K | 1.181 | 0.98 | |
| 11_E | 34_S | 1.18 | 0.98 | |
| 183_S | 186_Y | 1.165 | 0.97 | |
| 67_R | 92_K | 1.155 | 0.97 | |
| 168_N | 178_P | 1.155 | 0.97 | |
| 185_R | 189_F | 1.13 | 0.97 | |
| 9_D | 54_D | 1.125 | 0.97 | |
| 168_N | 172_E | 1.113 | 0.96 | |
| 50_V | 119_Y | 1.108 | 0.96 | |
| 4_V | 27_I | 1.105 | 0.96 | |
| 38_D | 41_K | 1.094 | 0.96 | |
| 132_Q | 144_E | 1.088 | 0.96 | |
| 39_A | 43_C | 1.088 | 0.96 | |
| 88_P | 92_K | 1.087 | 0.96 | |
| 132_Q | 139_E | 1.069 | 0.95 | |
| 118_V | 121_G | 1.06 | 0.95 | |
| 31_G | 46_N | 1.059 | 0.95 | |
| 17_I | 81_L | 1.053 | 0.95 | |
| 38_D | 42_W | 1.051 | 0.94 | |
| 57_M | 65_A | 1.051 | 0.94 | |
| 7_V | 51_V | 1.048 | 0.94 | |
| 63_L | 92_K | 1.046 | 0.94 | |
| 158_M | 200_L | 1.045 | 0.94 | |
| 30_V | 46_N | 1.045 | 0.94 | |
| 156_Q | 159_L | 1.036 | 0.94 | |
| 5_L | 39_A | 1.035 | 0.94 | |
| 165_Q | 169_E | 1.033 | 0.94 | |
| 203_L | 207_H | 1.026 | 0.94 | |
| 56_S | 83_V | 1.023 | 0.93 | |
| 142_K | 147_F | 1.019 | 0.93 | |
| 17_I | 111_V | 1.017 | 0.93 | |
| 91_A | 109_Q | 1.016 | 0.93 | |
| 51_V | 69_I | 1.015 | 0.93 | |
| 87_N | 91_A | 1.012 | 0.93 | |
| 8_D | 57_M | 1.007 | 0.93 | |
| 135_L | 162_T | 1.006 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3c3wA | 2 | 1 | 100 | 0.122 | Contact Map | 0.631 |
| 4gvpA | 4 | 0.9541 | 100 | 0.135 | Contact Map | 0.805 |
| 4hyeA | 2 | 0.9174 | 100 | 0.152 | Contact Map | 0.799 |
| 1a04A | 2 | 0.9633 | 100 | 0.154 | Contact Map | 0.701 |
| 3kloA | 4 | 0.9862 | 100 | 0.172 | Contact Map | 0.451 |
| 1yioA | 1 | 0.9404 | 100 | 0.195 | Contact Map | 0.694 |
| 1ys7A | 2 | 0.9725 | 100 | 0.201 | Contact Map | 0.764 |
| 1p2fA | 1 | 0.9587 | 100 | 0.211 | Contact Map | 0.745 |
| 1kgsA | 1 | 0.9725 | 100 | 0.218 | Contact Map | 0.697 |
| 3q9sA | 1 | 0.9312 | 100 | 0.22 | Contact Map | 0.682 |
Sequence Conservation (Image Generated using WebLogo v3)