| UniProt: | P0A9Q1 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10061 | ||
| Length: | 238 (228) | ||
| Sequences: | 26799 | ||
| Seq/Len: | 117.54 |
| ARCA
Paralog alert: 0.94 [within 20: 0.54] - ratio of genomes with paralogs Cluster includes: ARCA BAER BASR BGLJ CPXR CREB CSGD CUSR DCUR DPIA EVGA FIMZ KDPE NARL NARP OMPR PHOB PHOP QSEB RCSB RSTA TORR UHPA UVRY YEDW YGEK YHJB |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 16_R | 32_E | 3.576 | 1.00 | |
| 16_R | 34_T | 2.763 | 1.00 | |
| 37_A | 59_G | 2.545 | 1.00 | |
| 20_K | 32_E | 2.541 | 1.00 | |
| 9_V | 39_M | 2.534 | 1.00 | |
| 35_D | 59_G | 2.483 | 1.00 | |
| 182_R | 202_D | 2.462 | 1.00 | |
| 199_R | 202_D | 2.361 | 1.00 | |
| 31_F | 48_I | 2.347 | 1.00 | |
| 164_S | 167_R | 2.345 | 1.00 | |
| 60_K | 68_E | 2.335 | 1.00 | |
| 86_E | 106_N | 2.311 | 1.00 | |
| 165_E | 211_H | 2.31 | 1.00 | |
| 20_K | 24_E | 2.286 | 1.00 | |
| 36_G | 60_K | 2.153 | 1.00 | |
| 89_K | 109_E | 2.142 | 1.00 | |
| 35_D | 38_E | 2.138 | 1.00 | |
| 61_N | 64_L | 2.002 | 1.00 | |
| 141_G | 155_D | 1.977 | 1.00 | |
| 22_I | 107_P | 1.96 | 1.00 | |
| 5_H | 29_D | 1.937 | 1.00 | |
| 40_H | 68_E | 1.895 | 1.00 | |
| 223_A | 233_C | 1.881 | 1.00 | |
| 138_K | 143_E | 1.86 | 1.00 | |
| 170_L | 174_E | 1.842 | 1.00 | |
| 50_L | 114_A | 1.838 | 1.00 | |
| 34_T | 38_E | 1.809 | 1.00 | |
| 204_T | 207_R | 1.808 | 1.00 | |
| 33_A | 42_I | 1.805 | 1.00 | |
| 150_S | 158_Q | 1.8 | 1.00 | |
| 223_A | 231_R | 1.782 | 1.00 | |
| 55_I | 79_F | 1.768 | 1.00 | |
| 5_H | 31_F | 1.755 | 1.00 | |
| 144_L | 173_C | 1.754 | 1.00 | |
| 79_F | 92_G | 1.741 | 1.00 | |
| 66_A | 77_L | 1.73 | 1.00 | |
| 78_M | 117_L | 1.726 | 1.00 | |
| 94_E | 115_R | 1.708 | 1.00 | |
| 171_H | 185_L | 1.706 | 1.00 | |
| 53_M | 66_A | 1.689 | 1.00 | |
| 98_D | 120_R | 1.665 | 1.00 | |
| 53_M | 65_L | 1.664 | 1.00 | |
| 23_F | 114_A | 1.664 | 1.00 | |
| 175_N | 178_K | 1.657 | 1.00 | |
| 56_N | 83_R | 1.641 | 1.00 | |
| 9_V | 57_L | 1.586 | 1.00 | |
| 143_E | 153_G | 1.556 | 1.00 | |
| 171_H | 188_K | 1.535 | 1.00 | |
| 66_A | 79_F | 1.535 | 1.00 | |
| 68_E | 71_E | 1.516 | 1.00 | |
| 83_R | 88_D | 1.504 | 1.00 | |
| 7_L | 33_A | 1.496 | 1.00 | |
| 51_V | 75_V | 1.486 | 1.00 | |
| 181_S | 184_E | 1.453 | 1.00 | |
| 79_F | 97_A | 1.449 | 1.00 | |
| 40_H | 65_L | 1.431 | 1.00 | |
| 10_E | 16_R | 1.428 | 1.00 | |
| 36_G | 65_L | 1.404 | 0.99 | |
| 26_E | 111_T | 1.39 | 0.99 | |
| 60_K | 64_L | 1.38 | 0.99 | |
| 31_F | 42_I | 1.377 | 0.99 | |
| 99_D | 113_R | 1.376 | 0.99 | |
| 63_L | 95_I | 1.375 | 0.99 | |
| 150_S | 153_G | 1.357 | 0.99 | |
| 70_R | 98_D | 1.317 | 0.99 | |
| 176_P | 180_Q | 1.307 | 0.99 | |
| 55_I | 63_L | 1.305 | 0.99 | |
| 180_Q | 188_K | 1.303 | 0.99 | |
| 64_L | 67_R | 1.301 | 0.99 | |
| 205_I | 209_R | 1.289 | 0.99 | |
| 41_Q | 45_E | 1.283 | 0.99 | |
| 145_D | 148_S | 1.265 | 0.99 | |
| 171_H | 180_Q | 1.242 | 0.98 | |
| 42_I | 46_Y | 1.242 | 0.98 | |
| 37_A | 60_K | 1.24 | 0.98 | |
| 225_I | 231_R | 1.236 | 0.98 | |
| 42_I | 45_E | 1.233 | 0.98 | |
| 28_Y | 115_R | 1.208 | 0.98 | |
| 149_R | 167_R | 1.193 | 0.98 | |
| 50_L | 118_L | 1.189 | 0.98 | |
| 149_R | 228_E | 1.187 | 0.98 | |
| 43_L | 69_L | 1.183 | 0.98 | |
| 40_H | 60_K | 1.173 | 0.98 | |
| 117_L | 120_R | 1.167 | 0.97 | |
| 200_T | 204_T | 1.166 | 0.97 | |
| 85_N | 88_D | 1.158 | 0.97 | |
| 67_R | 91_L | 1.143 | 0.97 | |
| 146_I | 170_L | 1.141 | 0.97 | |
| 27_G | 115_R | 1.14 | 0.97 | |
| 33_A | 39_M | 1.139 | 0.97 | |
| 37_A | 41_Q | 1.138 | 0.97 | |
| 144_L | 166_F | 1.137 | 0.97 | |
| 31_F | 46_Y | 1.136 | 0.97 | |
| 136_S | 143_E | 1.134 | 0.97 | |
| 178_K | 184_E | 1.12 | 0.96 | |
| 162_P | 211_H | 1.116 | 0.96 | |
| 203_V | 206_R | 1.11 | 0.96 | |
| 13_L | 34_T | 1.108 | 0.96 | |
| 56_N | 82_G | 1.1 | 0.96 | |
| 38_E | 41_Q | 1.099 | 0.96 | |
| 153_G | 158_Q | 1.097 | 0.96 | |
| 19_L | 80_L | 1.096 | 0.96 | |
| 9_V | 51_V | 1.088 | 0.96 | |
| 6_I | 28_Y | 1.085 | 0.96 | |
| 44_S | 72_Q | 1.083 | 0.96 | |
| 8_I | 30_V | 1.078 | 0.95 | |
| 183_A | 198_D | 1.076 | 0.95 | |
| 57_L | 65_L | 1.062 | 0.95 | |
| 39_M | 43_L | 1.056 | 0.95 | |
| 171_H | 175_N | 1.054 | 0.95 | |
| 11_D | 54_D | 1.053 | 0.95 | |
| 7_L | 39_M | 1.048 | 0.94 | |
| 87_V | 91_L | 1.04 | 0.94 | |
| 90_I | 108_R | 1.039 | 0.94 | |
| 7_L | 48_I | 1.036 | 0.94 | |
| 86_E | 90_I | 1.035 | 0.94 | |
| 139_F | 232_F | 1.024 | 0.93 | |
| 147_N | 178_K | 1.023 | 0.93 | |
| 10_E | 57_L | 1.022 | 0.93 | |
| 38_E | 42_I | 1.019 | 0.93 | |
| 183_A | 187_K | 1.013 | 0.93 | |
| 78_M | 99_D | 1.012 | 0.93 | |
| 63_L | 91_L | 1.007 | 0.93 | |
| 199_R | 203_V | 1.003 | 0.93 | |
| 175_N | 179_I | 1.002 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2gwrA | 1 | 0.9622 | 100 | 0.101 | Contact Map | 0.674 |
| 3r0jA | 2 | 0.9622 | 100 | 0.102 | Contact Map | 0.675 |
| 1ys7A | 2 | 0.958 | 100 | 0.106 | Contact Map | 0.78 |
| 2oqrA | 1 | 0.9622 | 100 | 0.111 | Contact Map | 0.564 |
| 4b09A | 12 | 0.9706 | 100 | 0.133 | Contact Map | 0.672 |
| 1kgsA | 1 | 0.9412 | 100 | 0.14 | Contact Map | 0.715 |
| 2hqrA | 2 | 0.916 | 100 | 0.154 | Contact Map | 0.677 |
| 1p2fA | 1 | 0.9202 | 100 | 0.16 | Contact Map | 0.74 |
| 3q9sA | 1 | 0.9034 | 100 | 0.174 | Contact Map | 0.682 |
| 3c3wA | 2 | 0.8992 | 100 | 0.269 | Contact Map | 0.649 |
Sequence Conservation (Image Generated using WebLogo v3)