| UniProt: | P39404 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12594 | ||
| Length: | 225 (202) | ||
| Sequences: | 28784 | ||
| Seq/Len: | 142.50 |
| BGLJ
Paralog alert: 0.94 [within 20: 0.56] - ratio of genomes with paralogs Cluster includes: ARCA BAER BASR BGLJ CPXR CREB CSGD CUSR DCUR DPIA EVGA FIMZ KDPE NARL NARP OMPR PHOB PHOP QSEB RCSB RSTA TORR UHPA UVRY YEDW YGEK YHJB |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 21_S | 40_T | 3.598 | 1.00 | |
| 21_S | 42_T | 2.912 | 1.00 | |
| 25_E | 40_T | 2.693 | 1.00 | |
| 45_E | 67_R | 2.593 | 1.00 | |
| 156_T | 159_E | 2.464 | 1.00 | |
| 43_S | 67_R | 2.415 | 1.00 | |
| 14_I | 47_F | 2.403 | 1.00 | |
| 71_R | 79_E | 2.368 | 1.00 | |
| 25_E | 29_R | 2.304 | 1.00 | |
| 98_E | 119_T | 2.287 | 1.00 | |
| 182_K | 185_R | 2.211 | 1.00 | |
| 44_Q | 71_R | 2.208 | 1.00 | |
| 157_E | 194_K | 2.198 | 1.00 | |
| 170_M | 185_R | 2.188 | 1.00 | |
| 43_S | 46_S | 2.107 | 1.00 | |
| 102_I | 122_I | 2.095 | 1.00 | |
| 52_S | 83_K | 2.063 | 1.00 | |
| 48_Q | 79_E | 2.041 | 1.00 | |
| 27_L | 120_L | 2.039 | 1.00 | |
| 10_N | 35_P | 1.945 | 1.00 | |
| 72_E | 75_S | 1.878 | 1.00 | |
| 42_T | 46_S | 1.86 | 1.00 | |
| 41_Y | 50_A | 1.843 | 1.00 | |
| 162_R | 166_R | 1.831 | 1.00 | |
| 37_K | 56_F | 1.786 | 1.00 | |
| 187_H | 190_N | 1.765 | 1.00 | |
| 58_A | 127_L | 1.742 | 1.00 | |
| 90_L | 130_S | 1.709 | 1.00 | |
| 77_L | 89_R | 1.708 | 1.00 | |
| 28_F | 127_L | 1.698 | 1.00 | |
| 91_V | 105_L | 1.671 | 1.00 | |
| 61_F | 76_C | 1.652 | 1.00 | |
| 163_F | 176_Q | 1.624 | 1.00 | |
| 107_P | 128_F | 1.615 | 1.00 | |
| 64_S | 95_D | 1.597 | 1.00 | |
| 163_F | 173_I | 1.588 | 1.00 | |
| 63_F | 91_V | 1.562 | 1.00 | |
| 111_D | 133_G | 1.561 | 1.00 | |
| 61_F | 77_L | 1.561 | 1.00 | |
| 169_S | 172_Q | 1.559 | 1.00 | |
| 79_E | 82_I | 1.55 | 1.00 | |
| 12_A | 41_Y | 1.546 | 1.00 | |
| 31_F | 124_H | 1.521 | 1.00 | |
| 77_L | 91_V | 1.515 | 1.00 | |
| 168_Y | 176_Q | 1.49 | 1.00 | |
| 91_V | 110_L | 1.485 | 1.00 | |
| 10_N | 37_K | 1.485 | 1.00 | |
| 205_E | 213_M | 1.483 | 1.00 | |
| 59_V | 87_T | 1.45 | 1.00 | |
| 71_R | 75_S | 1.447 | 1.00 | |
| 81_A | 111_D | 1.435 | 1.00 | |
| 44_Q | 76_C | 1.434 | 1.00 | |
| 14_I | 65_A | 1.422 | 1.00 | |
| 67_R | 71_R | 1.404 | 0.99 | |
| 95_D | 101_L | 1.391 | 0.99 | |
| 15_E | 21_S | 1.385 | 0.99 | |
| 48_Q | 76_C | 1.374 | 0.99 | |
| 39_H | 56_F | 1.368 | 0.99 | |
| 74_L | 108_S | 1.347 | 0.99 | |
| 75_S | 78_T | 1.322 | 0.99 | |
| 79_E | 83_K | 1.313 | 0.99 | |
| 50_A | 54_I | 1.307 | 0.99 | |
| 45_E | 71_R | 1.303 | 0.99 | |
| 49_D | 53_R | 1.29 | 0.99 | |
| 50_A | 53_R | 1.257 | 0.99 | |
| 63_F | 74_L | 1.253 | 0.99 | |
| 112_G | 126_E | 1.252 | 0.99 | |
| 163_F | 168_Y | 1.245 | 0.98 | |
| 154_S | 194_K | 1.21 | 0.98 | |
| 34_N | 128_F | 1.197 | 0.98 | |
| 18_V | 42_T | 1.196 | 0.98 | |
| 45_E | 49_D | 1.193 | 0.98 | |
| 33_G | 128_F | 1.191 | 0.98 | |
| 48_Q | 71_R | 1.185 | 0.98 | |
| 51_M | 80_L | 1.183 | 0.98 | |
| 188_K | 192_M | 1.174 | 0.98 | |
| 97_I | 101_L | 1.16 | 0.97 | |
| 31_F | 128_F | 1.143 | 0.97 | |
| 186_A | 189_F | 1.136 | 0.97 | |
| 78_T | 104_S | 1.133 | 0.97 | |
| 171_T | 181_I | 1.133 | 0.97 | |
| 58_A | 131_L | 1.13 | 0.97 | |
| 171_T | 175_E | 1.125 | 0.97 | |
| 16_K | 62_S | 1.115 | 0.96 | |
| 130_S | 133_G | 1.11 | 0.96 | |
| 46_S | 49_D | 1.105 | 0.96 | |
| 11_V | 34_N | 1.105 | 0.96 | |
| 41_Y | 47_F | 1.105 | 0.96 | |
| 183_T | 187_H | 1.102 | 0.96 | |
| 100_R | 104_S | 1.094 | 0.96 | |
| 39_H | 54_I | 1.081 | 0.95 | |
| 24_I | 92_I | 1.079 | 0.95 | |
| 74_L | 104_S | 1.074 | 0.95 | |
| 168_Y | 172_Q | 1.073 | 0.95 | |
| 37_K | 50_A | 1.061 | 0.95 | |
| 46_S | 50_A | 1.047 | 0.94 | |
| 14_I | 59_V | 1.042 | 0.94 | |
| 47_F | 51_M | 1.041 | 0.94 | |
| 197_V | 206_A | 1.038 | 0.94 | |
| 12_A | 56_F | 1.035 | 0.94 | |
| 129_L | 134_V | 1.032 | 0.94 | |
| 98_E | 103_G | 1.029 | 0.94 | |
| 12_A | 47_F | 1.023 | 0.93 | |
| 24_I | 123_F | 1.012 | 0.93 | |
| 103_G | 121_E | 1.012 | 0.93 | |
| 65_A | 76_C | 1.009 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3c3wA | 2 | 0.9467 | 100 | 0.181 | Contact Map | 0.628 |
| 4gvpA | 4 | 0.8978 | 100 | 0.193 | Contact Map | 0.805 |
| 4hyeA | 2 | 0.92 | 100 | 0.2 | Contact Map | 0.798 |
| 1a04A | 2 | 0.9111 | 100 | 0.201 | Contact Map | 0.684 |
| 3kloA | 4 | 0.9422 | 100 | 0.211 | Contact Map | 0.463 |
| 1ys7A | 2 | 0.9289 | 100 | 0.218 | Contact Map | 0.779 |
| 1yioA | 1 | 0.92 | 100 | 0.239 | Contact Map | 0.688 |
| 4b09A | 12 | 0.9511 | 100 | 0.247 | Contact Map | 0.673 |
| 1p2fA | 1 | 0.9022 | 100 | 0.252 | Contact Map | 0.756 |
| 1kgsA | 1 | 0.9067 | 100 | 0.257 | Contact Map | 0.716 |
Sequence Conservation (Image Generated using WebLogo v3)