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OPENSEQ.org

PYRH - YIJO
UniProt: P0A7E9 - P32677
Length: 524
Sequences: 370
Seq/Len: 0.78
I_Prob: 0.00

PYRH - Uridylate kinase
Paralog alert: 0.90 [within 20: 0.10] - ratio of genomes with paralogs
Cluster includes: PYRH
YIJO - Uncharacterized HTH-type transcriptional regulator YijO
Paralog alert: 0.78 [within 20: 0.20] - ratio of genomes with paralogs
Cluster includes: ADIY APPY ARAC CHBR ENVY EUTR FEAR GADW GADX MARA MELR RHAR RHAS SOXS YBCM YDEO YDIP YEAM YIDL YIJO YKGD YPDC YQHC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
12_I 174_I 1.44 0.00
44_L 197_I 1.02 0.00
12_I 71_G 0.98 0.00
133_I 125_L 0.98 0.00
101_N 202_L 0.96 0.00
153_G 239_E 0.96 0.00
127_R 207_Q 0.91 0.00
159_D 68_V 0.86 0.00
113_V 93_Q 0.84 0.00
170_V 213_G 0.83 0.00
124_S 87_V 0.79 0.00
35_D 257_R 0.78 0.00
53_V 171_F 0.77 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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