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OPENSEQ.org

RIML - YDCR
UniProt: P13857 - P77730
Length: 647
Sequences: 611
Seq/Len: 0.96
I_Prob: 0.00

RIML - Ribosomal-protein-serine acetyltransferase
Paralog alert: 0.87 [within 20: 0.17] - ratio of genomes with paralogs
Cluster includes: ATDA PHNO RIMI RIMJ RIML YAFP YEDL YHHY YIAC YJAB YJGM YNCA YPEA
YDCR - Uncharacterized HTH-type transcriptional regulator YdcR
Paralog alert: 0.71 [within 20: 0.08] - ratio of genomes with paralogs
Cluster includes: AAT ALAA ALAC ARNB AVTA CSDA HIS8 ISCS MALY RFFA SERC SUFS TYRB YBDL YDCR YJIR
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
155_C 222_V 1.05 0.00
79_I 229_Q 0.98 0.00
25_Y 180_L 0.92 0.00
72_I 462_K 0.90 0.00
117_L 418_A 0.85 0.00
146_L 272_Y 0.83 0.00
47_S 163_I 0.83 0.00
72_I 271_Q 0.82 0.00
18_E 377_R 0.82 0.00
72_I 265_L 0.81 0.00
168_D 7_L 0.78 0.00
81_V 257_L 0.78 0.00
102_E 258_T 0.75 0.00
78_L 38_M 0.73 0.00
38_S 163_I 0.72 0.00
96_I 414_L 0.71 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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