| UniProt: | P0A951 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12447 | ||
| Length: | 186 (171) | ||
| Sequences: | 9359 | ||
| Seq/Len: | 54.73 |
| ATDA
Paralog alert: 0.84 [within 20: 0.16] - ratio of genomes with paralogs Cluster includes: ATDA PHNO RIMI RIMJ RIML YAFP YEDL YHHY YIAC YJAB YJGM YNCA YPEA |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 101_T | 137_K | 3.42 | 1.00 | |
| 10_R | 63_E | 3.098 | 1.00 | |
| 10_R | 16_D | 2.955 | 1.00 | |
| 143_E | 163_C | 2.61 | 1.00 | |
| 122_L | 135_Y | 2.577 | 1.00 | |
| 142_V | 145_E | 2.569 | 1.00 | |
| 133_H | 136_R | 2.37 | 1.00 | |
| 142_V | 160_I | 2.21 | 1.00 | |
| 6_S | 102_R | 2.189 | 1.00 | |
| 109_D | 113_T | 2.091 | 1.00 | |
| 84_A | 117_L | 2.005 | 1.00 | |
| 108_M | 120_L | 2 | 1.00 | |
| 124_V | 132_I | 1.907 | 1.00 | |
| 74_L | 111_G | 1.9 | 1.00 | |
| 61_V | 68_K | 1.873 | 1.00 | |
| 12_L | 61_V | 1.832 | 1.00 | |
| 136_R | 142_V | 1.817 | 1.00 | |
| 4_A | 106_L | 1.812 | 1.00 | |
| 4_A | 102_R | 1.796 | 1.00 | |
| 124_V | 135_Y | 1.792 | 1.00 | |
| 118_Y | 148_H | 1.786 | 1.00 | |
| 132_I | 160_I | 1.746 | 1.00 | |
| 148_H | 167_H | 1.744 | 1.00 | |
| 108_M | 140_F | 1.725 | 1.00 | |
| 69_A | 94_Y | 1.72 | 1.00 | |
| 106_L | 109_D | 1.704 | 1.00 | |
| 26_N | 92_P | 1.695 | 1.00 | |
| 126_K | 158_N | 1.691 | 1.00 | |
| 132_I | 136_R | 1.688 | 1.00 | |
| 111_G | 120_L | 1.67 | 1.00 | |
| 119_K | 163_C | 1.667 | 1.00 | |
| 145_E | 160_I | 1.654 | 1.00 | |
| 28_S | 92_P | 1.651 | 1.00 | |
| 72_V | 107_A | 1.612 | 1.00 | |
| 151_F | 156_Y | 1.557 | 1.00 | |
| 119_K | 143_E | 1.536 | 1.00 | |
| 90_I | 100_A | 1.511 | 1.00 | |
| 86_F | 104_A | 1.508 | 1.00 | |
| 18_R | 41_F | 1.488 | 1.00 | |
| 108_M | 164_I | 1.482 | 1.00 | |
| 132_I | 162_M | 1.458 | 1.00 | |
| 132_I | 142_V | 1.447 | 1.00 | |
| 67_E | 93_E | 1.439 | 1.00 | |
| 72_V | 103_A | 1.435 | 1.00 | |
| 19_Y | 67_E | 1.404 | 0.99 | |
| 145_E | 158_N | 1.395 | 0.99 | |
| 104_A | 138_L | 1.394 | 0.99 | |
| 19_Y | 68_K | 1.391 | 0.99 | |
| 101_T | 134_I | 1.382 | 0.99 | |
| 101_T | 138_L | 1.349 | 0.99 | |
| 112_F | 166_Q | 1.346 | 0.99 | |
| 63_E | 66_G | 1.317 | 0.99 | |
| 146_L | 161_R | 1.313 | 0.99 | |
| 62_V | 103_A | 1.304 | 0.99 | |
| 62_V | 90_I | 1.268 | 0.99 | |
| 129_E | 132_I | 1.258 | 0.99 | |
| 14_R | 49_D | 1.257 | 0.99 | |
| 17_L | 48_Y | 1.238 | 0.98 | |
| 110_Y | 114_V | 1.237 | 0.98 | |
| 88_I | 135_Y | 1.229 | 0.98 | |
| 91_S | 94_Y | 1.223 | 0.98 | |
| 131_A | 135_Y | 1.206 | 0.98 | |
| 71_L | 89_I | 1.189 | 0.98 | |
| 126_K | 160_I | 1.176 | 0.98 | |
| 127_E | 157_R | 1.169 | 0.97 | |
| 88_I | 131_A | 1.165 | 0.97 | |
| 126_K | 145_E | 1.156 | 0.97 | |
| 4_A | 7_V | 1.152 | 0.97 | |
| 148_H | 158_N | 1.147 | 0.97 | |
| 118_Y | 156_Y | 1.138 | 0.97 | |
| 18_R | 22_Q | 1.131 | 0.97 | |
| 129_E | 133_H | 1.122 | 0.97 | |
| 142_V | 162_M | 1.12 | 0.96 | |
| 19_Y | 22_Q | 1.118 | 0.96 | |
| 47_L | 51_H | 1.117 | 0.96 | |
| 135_Y | 140_F | 1.114 | 0.96 | |
| 8_K | 63_E | 1.097 | 0.96 | |
| 29_V | 95_Q | 1.087 | 0.96 | |
| 100_A | 134_I | 1.081 | 0.95 | |
| 108_M | 138_L | 1.07 | 0.95 | |
| 85_E | 123_I | 1.064 | 0.95 | |
| 149_E | 159_A | 1.055 | 0.95 | |
| 147_M | 163_C | 1.045 | 0.94 | |
| 110_Y | 115_L | 1.037 | 0.94 | |
| 105_K | 138_L | 1.031 | 0.94 | |
| 60_F | 110_Y | 1.03 | 0.94 | |
| 64_C | 69_A | 1.028 | 0.94 | |
| 41_F | 45_S | 1.023 | 0.93 | |
| 46_D | 50_K | 1.017 | 0.93 | |
| 95_Q | 130_K | 1.008 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2vzyA | 4 | 0.9892 | 100 | 0.315 | Contact Map | 0.768 |
| 3pzjA | 2 | 0.9247 | 100 | 0.316 | Contact Map | 0.773 |
| 2z10A | 1 | 0.9946 | 100 | 0.326 | Contact Map | 0.76 |
| 1yreA | 4 | 0.9409 | 100 | 0.334 | Contact Map | 0.783 |
| 3tthA | 12 | 0.9086 | 100 | 0.335 | Contact Map | 0.797 |
| 1nslA | 6 | 0.9301 | 100 | 0.344 | Contact Map | 0.894 |
| 3r9fA | 2 | 0.8978 | 100 | 0.346 | Contact Map | 0.773 |
| 3tcvA | 2 | 1 | 100 | 0.357 | Contact Map | 0.815 |
| 4mhdA | 3 | 0.9355 | 100 | 0.358 | Contact Map | 0.851 |
| 4mi4A | 3 | 0.9355 | 100 | 0.358 | Contact Map | 0.855 |
Sequence Conservation (Image Generated using WebLogo v3)