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YDCR - YDCT
UniProt: P77730 - P77795
Length: 805
Sequences: 575
Seq/Len: 0.72
I_Prob: 0.00

YDCR - Uncharacterized HTH-type transcriptional regulator YdcR
Paralog alert: 0.71 [within 20: 0.08] - ratio of genomes with paralogs
Cluster includes: AAT ALAA ALAC ARNB AVTA CSDA HIS8 ISCS MALY RFFA SERC SUFS TYRB YBDL YDCR YJIR
YDCT - Uncharacterized ABC transporter ATP-binding protein YdcT
Paralog alert: 0.85 [within 20: 0.14] - ratio of genomes with paralogs
Cluster includes: ARTP BTUD CCMA CYSA DDPD DDPF DPPD DPPF FBPC FECE FEPC FHUC FTSE GLNQ GLTL HISP LIVF LIVG LOLD LPTB MALK METN MLAF MODC NIKD NIKE OPPD OPPF PHNC PHNK PHNL POTA POTG PROV PSTB SAPD SAPF SSUB SUFC TAUB THIQ UGPC YADG YBBA YBBL YCJV YDCT YECC YEHX YHDZ YNJD ZNUC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
257_L 24_S 0.97 0.00
413_E 212_R 0.85 0.00
173_T 114_M 0.85 0.00
258_T 55_Q 0.82 0.00
324_A 99_Y 0.80 0.00
154_I 265_L 0.79 0.00
305_L 10_V 0.75 0.00
194_V 149_L 0.74 0.00
320_I 208_F 0.74 0.00
170_I 252_M 0.72 0.00
180_L 93_I 0.72 0.00
418_A 222_L 0.72 0.00
179_A 273_A 0.71 0.00
149_E 208_F 0.71 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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