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OPENSEQ.org

LSRB - NANK
UniProt: P76142 - P45425
Length: 631
Sequences: 587
Seq/Len: 1.01
I_Prob: 0.00

LSRB - Autoinducer 2-binding protein LsrB
Paralog alert: 0.78 [within 20: 0.15] - ratio of genomes with paralogs
Cluster includes: ALSB ARAF ASCG CRA CYTR DGAL EBGR GALR GALS GNTR IDNR LACI LSRB MALI PURR RBSB RBSR TORT TRER XYLF YCJW YPHF YTFQ
NANK - N-acetylmannosamine kinase
Paralog alert: 0.81 [within 20: 0.07] - ratio of genomes with paralogs
Cluster includes: ALSK MAK MLC NAGC NAGK NANK YPHH
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
78_N 237_V 1.30 0.00
59_D 8_I 0.95 0.00
178_I 214_I 0.92 0.00
242_I 46_S 0.86 0.00
88_I 253_V 0.83 0.00
104_R 8_I 0.80 0.00
155_V 222_A 0.78 0.00
122_E 224_L 0.76 0.00
146_R 93_E 0.76 0.00
196_D 79_N 0.75 0.00
63_D 237_V 0.75 0.00
59_D 90_K 0.74 0.00
180_K 100_T 0.74 0.00
82_N 70_G 0.73 0.00
146_R 47_A 0.73 0.00
228_A 61_I 0.73 0.00
179_A 183_I 0.72 0.00
138_G 214_I 0.72 0.00
59_D 125_V 0.72 0.00
54_K 18_I 0.72 0.00
257_R 215_H 0.71 0.00
81_V 238_V 0.70 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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