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OPENSEQ.org
SAPC - YCJN
UniProt: P0AGH5 - P76042
Length: 726
Sequences: 561
Seq/Len: 0.81
I_Prob: 0.00
SAPC - Peptide transport system permease protein SapC
Paralog alert: 0.77 [within 20: 0.11] - ratio of genomes with paralogs
Cluster includes: DDPB DDPC DPPB DPPC GSIC GSID NIKB NIKC OPPB OPPC SAPB SAPC YEJB YEJE 		YCJN - Putative ABC transporter periplasmic-binding protein YcjN
Paralog alert: 0.81 [within 20: 0.11] - ratio of genomes with paralogs
Cluster includes: CYSP MALE MODA POTD POTF SUBI THIB UGPB YCJN YDCS YNJB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
34_Y 406_T 1.04 0.00
182_H 231_L 0.86 0.00
251_M 283_G 0.84 0.00
119_F 168_W 0.83 0.00
188_E 397_V 0.82 0.00
88_L 170_Q 0.82 0.00
283_L 229_Q 0.81 0.00
192_A 303_I 0.81 0.00
33_L 31_I 0.81 0.00
256_L 63_K 0.81 0.00
88_L 213_V 0.80 0.00
272_A 122_F 0.80 0.00
247_E 416_L 0.79 0.00
181_V 128_R 0.77 0.00
77_F 344_K 0.77 0.00
124_H 31_I 0.77 0.00
107_L 44_A 0.77 0.00
120_A 162_L 0.76 0.00
87_V 51_A 0.76 0.00
103_F 359_K 0.76 0.00
152_A 400_S 0.75 0.00
55_D 62_V 0.72 0.00
220_I 157_L 0.72 0.00
185_L 258_G 0.72 0.00
101_G 180_D 0.71 0.00
115_V 60_I 0.71 0.00
150_V 195_S 0.71 0.00
65_P 188_I 0.71 0.00
194_R 411_D 0.70 0.00
252_L 52_R 0.70 0.00
186_E 171_L 0.69 0.00
96_A 170_Q 0.69 0.00
35_G 314_A 0.69 0.00
119_F 247_D 0.69 0.00
204_L 169_Q 0.68 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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