| UniProt: | P0ACK5 - P31134 | ||
| Length: | 629 | ||
| Sequences: | 623 | ||
| Seq/Len: | 1.03 | ||
| I_Prob: | 0.00 |
| DEOR - Deoxyribose operon repressor
Paralog alert: 0.83 [within 20: 0.11] - ratio of genomes with paralogs Cluster includes: AGAR DEOR FUCR GATR GLPR SGCR SRLR ULAR YCIT YDJF YGBI YIHW |
POTG - Putrescine transport ATP-binding protein PotG Paralog alert: 0.82 [within 20: 0.14] - ratio of genomes with paralogs Cluster includes: ARTP BTUD CCMA CYSA DDPD DDPF DPPD DPPF FBPC FECE FEPC FHUC FTSE GLNQ GLTL HISP LIVF LIVG LOLD LPTB MALK METN MLAF MODC NIKD NIKE OPPD OPPF PHNC PHNK PHNL POTA POTG PROV PSTB SAPD SAPF SSUB SUFC TAUB THIQ UGPC YADG YBBA YBBL YCJV YDCT YECC YEHX YHDZ YNJD ZNUC |
Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
| 2p5t | BHDF:AEGC | Contact Map |
| i | j | Scaled Score | I_Prob |
| 138_A | 20_L | 0.81 | 0.00 |
| 38_I | 320_V | 0.80 | 0.00 |
| 34_S | 219_R | 0.79 | 0.00 |
| 24_L | 195_I | 0.77 | 0.00 |
| 90_V | 86_V | 0.76 | 0.00 |
| 99_D | 155_R | 0.75 | 0.00 |
| 38_I | 203_C | 0.72 | 0.00 |
| 140_L | 319_E | 0.72 | 0.00 |
| 29_A | 75_Q | 0.72 | 0.00 |
| 140_L | 72_S | 0.71 | 0.00 |
| 209_H | 237_I | 0.71 | 0.00 |
| 223_L | 73_A | 0.71 | 0.00 |
| 50_V | 135_G | 0.71 | 0.00 |
Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)
Text file of predictions (includes both intra and inter preds)