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OPENSEQ.org

FABG - YCED
UniProt: P0AEK2 - P0AB28
Length: 417
Sequences: 269
Seq/Len: 0.65
I_Prob: 0.00

FABG - 3-oxoacyl-[acyl-carrier-protein] reductase FabG
Paralog alert: 0.89 [within 20: 0.50] - ratio of genomes with paralogs
Cluster includes: BDCA ENTA FABG FABI FOLM HCAB HDHA IDNO KDUD SRLD UCPA YBBO YCIK YDFG YGCW YGFF YGHA YOHF
YCED - Uncharacterized protein YceD
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YCED
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
67_E 172_R 1.43 0.00
82_I 166_V 1.20 0.00
56_L 135_P 1.18 0.00
195_D 173_K 1.10 0.00
194_D 156_E 1.07 0.00
124_A 14_R 1.03 0.00
9_L 125_D 1.03 0.00
163_K 13_V 1.02 0.00
101_E 82_H 1.00 0.00
135_T 122_M 0.99 0.00
174_I 26_Y 0.99 0.00
59_N 31_V 0.98 0.00
36_A 24_G 0.96 0.00
170_A 116_E 0.96 0.00
121_V 6_L 0.95 0.00
224_S 162_N 0.95 0.00
101_E 111_V 0.93 0.00
8_A 166_V 0.92 0.00
69_V 69_V 0.92 0.00
128_K 112_N 0.90 0.00
57_M 160_K 0.90 0.00
149_A 69_V 0.89 0.00
221_F 71_L 0.89 0.00
64_A 135_P 0.88 0.00
119_K 51_F 0.88 0.00
242_Y 10_L 0.88 0.00
226_E 141_H 0.88 0.00
119_K 63_G 0.87 0.00
225_D 102_L 0.87 0.00
185_E 38_V 0.86 0.00
161_F 51_F 0.86 0.00
115_F 117_I 0.86 0.00
119_K 108_P 0.86 0.00
7_I 38_V 0.85 0.00
215_I 45_V 0.85 0.00
198_A 31_V 0.85 0.00
220_A 50_S 0.84 0.00
91_R 67_V 0.84 0.00
128_K 92_P 0.84 0.00
106_I 96_D 0.83 0.00
213_Q 23_Q 0.83 0.00
122_M 84_V 0.83 0.00
149_A 172_R 0.83 0.00
108_E 84_V 0.83 0.00
220_A 141_H 0.83 0.00
6_K 128_I 0.83 0.00
235_L 34_V 0.83 0.00
5_G 155_P 0.82 0.00
82_I 80_F 0.82 0.00
203_Q 93_V 0.82 0.00
7_I 84_V 0.81 0.00
116_R 61_L 0.81 0.00
124_A 138_D 0.81 0.00
224_S 116_E 0.81 0.00
213_Q 67_V 0.80 0.00
169_V 34_V 0.80 0.00
3_F 168_A 0.80 0.00
134_I 153_E 0.79 0.00
119_K 7_P 0.79 0.00
61_T 134_V 0.79 0.00
167_R 97_E 0.79 0.00
164_S 18_K 0.79 0.00
191_A 82_H 0.78 0.00
220_A 172_R 0.78 0.00
14_S 52_A 0.77 0.00
215_I 161_P 0.77 0.00
228_A 161_P 0.77 0.00
51_A 40_S 0.76 0.00
207_G 50_S 0.76 0.00
119_K 102_L 0.76 0.00
164_S 171_K 0.76 0.00
235_L 24_G 0.76 0.00
185_E 31_V 0.76 0.00
22_A 33_R 0.76 0.00
235_L 69_V 0.76 0.00
208_R 129_L 0.76 0.00
129_R 165_A 0.75 0.00
50_G 31_V 0.75 0.00
135_T 156_E 0.75 0.00
65_S 103_P 0.75 0.00
3_F 96_D 0.75 0.00
104_N 80_F 0.75 0.00
185_E 83_Q 0.75 0.00
143_M 107_E 0.74 0.00
204_V 111_V 0.74 0.00
162_S 64_D 0.74 0.00
207_G 118_D 0.74 0.00
235_L 45_V 0.74 0.00
195_D 159_Q 0.74 0.00
206_A 69_V 0.74 0.00
194_D 61_L 0.74 0.00
221_F 129_L 0.73 0.00
80_V 86_T 0.73 0.00
149_A 16_A 0.73 0.00
72_K 127_I 0.73 0.00
214_E 146_E 0.73 0.00
80_V 58_L 0.73 0.00
135_T 89_C 0.73 0.00
128_K 90_F 0.73 0.00
159_I 134_V 0.72 0.00
70_L 162_N 0.72 0.00
224_S 86_T 0.72 0.00
124_A 123_V 0.72 0.00
47_D 45_V 0.72 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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