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OPENSEQ.org

RSUA - YEJF
UniProt: P0AA43 - P33916
Length: 760
Sequences: 705
Seq/Len: 0.96
I_Prob: 0.00

RSUA - Ribosomal small subunit pseudouridine synthase A
Paralog alert: 0.95 [within 20: 0.07] - ratio of genomes with paralogs
Cluster includes: RLUA RLUB RLUC RLUD RLUE RLUF RSUA TRUC
YEJF - Uncharacterized ABC transporter ATP-binding protein YejF
Paralog alert: 0.90 [within 20: 0.18] - ratio of genomes with paralogs
Cluster includes: ALSA ARAG GSIA LSRA MGLA MODF RBSA UUP XYLG YBHF YBIT YEJF YHES YJJK YPHE YTFR
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
49_Y 303_K 1.16 0.00
109_V 30_L 1.00 0.00
3_L 330_L 1.00 0.00
64_M 142_G 0.98 0.00
41_L 492_L 0.96 0.00
7_I 360_I 0.95 0.00
27_V 381_V 0.91 0.00
5_K 30_L 0.87 0.00
145_A 383_Q 0.84 0.00
40_K 501_Q 0.83 0.00
27_V 71_I 0.83 0.00
63_F 317_L 0.83 0.00
20_R 446_L 0.81 0.00
140_V 111_L 0.81 0.00
27_V 156_Q 0.79 0.00
73_C 475_H 0.78 0.00
37_A 137_C 0.76 0.00
169_I 315_L 0.75 0.00
64_M 135_L 0.74 0.00
43_P 332_L 0.74 0.00
104_D 228_A 0.74 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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