| UniProt: | P75966 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG13447 | ||
| Length: | 217 (183) | ||
| Sequences: | 1898 | ||
| Seq/Len: | 10.37 |
| RLUE
Paralog alert: 0.45 [within 20: 0.00] - ratio of genomes with paralogs Cluster includes: RLUA RLUB RLUC RLUD RLUE RLUF RSUA TRUC |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 142_E | 169_K | 3.534 | 1.00 | |
| 44_F | 66_F | 3.032 | 1.00 | |
| 40_R | 214_E | 2.612 | 1.00 | |
| 123_E | 127_N | 2.602 | 1.00 | |
| 106_G | 171_T | 2.553 | 1.00 | |
| 178_R | 181_R | 2.545 | 1.00 | |
| 56_D | 60_R | 2.54 | 1.00 | |
| 44_F | 67_I | 2.531 | 1.00 | |
| 121_A | 189_F | 2.364 | 1.00 | |
| 108_I | 198_A | 2.359 | 1.00 | |
| 50_V | 66_F | 2.312 | 1.00 | |
| 208_A | 211_E | 2.048 | 1.00 | |
| 131_L | 182_R | 2.005 | 1.00 | |
| 49_D | 80_R | 1.958 | 1.00 | |
| 122_L | 126_R | 1.874 | 1.00 | |
| 131_L | 134_G | 1.872 | 1.00 | |
| 143_L | 166_S | 1.845 | 1.00 | |
| 141_A | 170_I | 1.736 | 1.00 | |
| 179_Q | 183_M | 1.726 | 1.00 | |
| 117_P | 166_S | 1.725 | 1.00 | |
| 43_L | 202_Y | 1.706 | 1.00 | |
| 108_I | 169_K | 1.63 | 1.00 | |
| 106_G | 140_G | 1.582 | 1.00 | |
| 98_L | 199_M | 1.582 | 1.00 | |
| 60_R | 80_R | 1.581 | 1.00 | |
| 130_T | 135_P | 1.578 | 1.00 | |
| 42_I | 212_W | 1.566 | 1.00 | |
| 83_E | 193_R | 1.514 | 1.00 | |
| 125_L | 187_V | 1.508 | 1.00 | |
| 89_T | 95_Q | 1.505 | 1.00 | |
| 121_A | 187_V | 1.497 | 1.00 | |
| 42_I | 214_E | 1.487 | 1.00 | |
| 123_E | 126_R | 1.485 | 1.00 | |
| 141_A | 168_L | 1.464 | 1.00 | |
| 95_Q | 99_T | 1.462 | 1.00 | |
| 83_E | 195_I | 1.46 | 1.00 | |
| 110_Y | 197_Y | 1.455 | 1.00 | |
| 203_S | 206_N | 1.449 | 1.00 | |
| 136_T | 139_A | 1.417 | 1.00 | |
| 135_P | 176_R | 1.415 | 1.00 | |
| 63_L | 86_L | 1.393 | 0.99 | |
| 45_N | 151_W | 1.389 | 0.99 | |
| 129_V | 187_V | 1.374 | 0.99 | |
| 134_G | 182_R | 1.369 | 0.99 | |
| 133_D | 182_R | 1.362 | 0.99 | |
| 82_S | 181_R | 1.36 | 0.99 | |
| 106_G | 173_Y | 1.335 | 0.99 | |
| 110_Y | 144_V | 1.326 | 0.99 | |
| 73_Y | 95_Q | 1.314 | 0.99 | |
| 183_M | 187_V | 1.313 | 0.99 | |
| 121_A | 124_A | 1.308 | 0.99 | |
| 52_P | 86_L | 1.294 | 0.99 | |
| 118_T | 121_A | 1.291 | 0.99 | |
| 136_T | 179_Q | 1.261 | 0.99 | |
| 125_L | 129_V | 1.26 | 0.99 | |
| 108_I | 171_T | 1.259 | 0.99 | |
| 112_Q | 165_T | 1.25 | 0.99 | |
| 41_V | 91_N | 1.243 | 0.98 | |
| 48_Y | 83_E | 1.237 | 0.98 | |
| 96_A | 99_T | 1.227 | 0.98 | |
| 61_K | 65_E | 1.22 | 0.98 | |
| 139_A | 179_Q | 1.216 | 0.98 | |
| 167_W | 195_I | 1.212 | 0.98 | |
| 44_F | 50_V | 1.209 | 0.98 | |
| 96_A | 100_Q | 1.175 | 0.98 | |
| 111_V | 168_L | 1.17 | 0.97 | |
| 110_Y | 169_K | 1.153 | 0.97 | |
| 82_S | 180_V | 1.147 | 0.97 | |
| 114_E | 190_P | 1.146 | 0.97 | |
| 144_V | 169_K | 1.14 | 0.97 | |
| 99_T | 199_M | 1.138 | 0.97 | |
| 125_L | 183_M | 1.137 | 0.97 | |
| 56_D | 80_R | 1.136 | 0.97 | |
| 139_A | 172_L | 1.119 | 0.96 | |
| 42_I | 72_V | 1.118 | 0.96 | |
| 43_L | 213_R | 1.118 | 0.96 | |
| 168_L | 184_T | 1.11 | 0.96 | |
| 117_P | 187_V | 1.097 | 0.96 | |
| 106_G | 198_A | 1.091 | 0.96 | |
| 56_D | 62_T | 1.09 | 0.96 | |
| 134_G | 176_R | 1.088 | 0.96 | |
| 54_F | 64_K | 1.084 | 0.96 | |
| 54_F | 74_A | 1.081 | 0.95 | |
| 85_L | 204_L | 1.077 | 0.95 | |
| 53_Q | 62_T | 1.077 | 0.95 | |
| 138_P | 141_A | 1.055 | 0.95 | |
| 49_D | 61_K | 1.051 | 0.94 | |
| 112_Q | 193_R | 1.051 | 0.94 | |
| 111_V | 180_V | 1.043 | 0.94 | |
| 122_L | 141_A | 1.039 | 0.94 | |
| 116_I | 166_S | 1.035 | 0.94 | |
| 184_T | 191_T | 1.03 | 0.94 | |
| 119_Q | 123_E | 1.025 | 0.93 | |
| 39_T | 91_N | 1.016 | 0.93 | |
| 81_D | 181_R | 1.004 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2olwA | 2 | 1 | 100 | 0.422 | Contact Map | 0.804 |
| 2gmlA | 2 | 0.7926 | 100 | 0.468 | Contact Map | 0.716 |
| 2omlA | 1 | 0.871 | 100 | 0.501 | Contact Map | 0.77 |
| 3dh3A | 4 | 0.9078 | 100 | 0.52 | Contact Map | 0.73 |
| 4lgtA | 2 | 0.9309 | 100 | 0.539 | Contact Map | 0.819 |
| 1vioA | 2 | 0.9078 | 100 | 0.556 | Contact Map | 0.773 |
| 1kskA | 1 | 0.9078 | 100 | 0.567 | Contact Map | 0.685 |
| 2i82A | 4 | 0.8387 | 100 | 0.661 | Contact Map | 0.481 |
| 1v9fA | 1 | 0.9263 | 99.9 | 0.687 | Contact Map | 0.5 |
| 1v9kA | 2 | 0.7788 | 99.9 | 0.695 | Contact Map | 0.474 |
Sequence Conservation (Image Generated using WebLogo v3)