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OPENSEQ.org
METI - METN
UniProt: P31547 - P30750
Length: 560
Sequences: 1053
Seq/Len: 1.91
I_Prob: 0.99
METI - D-methionine transport system permease protein MetI
Paralog alert: 0.93 [within 20: 0.64] - ratio of genomes with paralogs
Cluster includes: ARTM ARTQ GLNP GLTJ GLTK HISM HISQ METI PHNE SSUC TAUC YECS YEHW 		METN - Methionine import ATP-binding protein MetN
Paralog alert: 0.45 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: ARTP BTUD CCMA CYSA DDPD DDPF DPPD DPPF FBPC FECE FEPC FHUC FTSE GLNQ GLTL HISP LIVF LIVG LOLD LPTB MALK METN MLAF MODC NIKD NIKE OPPD OPPF PHNC PHNK PHNL POTA POTG PROV PSTB SAPD SAPF SSUB SUFC TAUB THIQ UGPC YADG YBBA YBBL YCJV YDCT YECC YEHX YHDZ YNJD ZNUC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3tuiCHDG:AEBFContact Map
3rlfAB:F:GContact Map
3d31AB:CDContact Map
2onkABGF:CHDIContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
136_K 108_E 2.38 0.99
128_A 105_L 1.96 0.96
119_L 105_L 1.47 0.80
125_A 85_G 1.30 0.66
124_R 74_E 1.20 0.56
118_G 92_N 1.20 0.55
128_A 109_L 1.16 0.51
13_V 269_L 1.05 0.39
128_A 94_L 1.05 0.39
126_M 106_P 1.05 0.38
132_Q 109_L 1.04 0.38
136_K 97_R 1.03 0.36
112_L 37_I 1.02 0.35
211_V 278_V 1.01 0.34
46_I 304_A 0.97 0.30
36_V 51_V 0.94 0.27
211_V 315_E 0.92 0.25
29_V 71_T 0.92 0.25
148_N 150_A 0.90 0.23
107_M 109_L 0.89 0.22
115_I 224_T 0.88 0.22
130_P 161_V 0.86 0.20
115_I 29_P 0.86 0.20
98_V 332_E 0.83 0.17
126_M 109_L 0.81 0.16
140_P 96_S 0.81 0.16
53_Y 174_A 0.80 0.15
55_T 328_A 0.80 0.15
151_T 217_G 0.79 0.15
107_M 297_I 0.79 0.15
42_R 103_V 0.79 0.14
91_A 305_G 0.78 0.14
167_V 195_L 0.78 0.14
158_V 130_L 0.77 0.13
12_G 164_C 0.77 0.13
107_M 303_Y 0.77 0.13
53_Y 330_L 0.76 0.13
46_I 191_G 0.76 0.12
97_T 160_K 0.76 0.12
211_V 230_S 0.75 0.12
126_M 20_A 0.74 0.12
30_I 76_E 0.74 0.12
22_V 271_L 0.74 0.12
111_A 288_R 0.74 0.11
23_S 306_G 0.74 0.11
81_V 6_N 0.74 0.11
208_D 196_L 0.73 0.11
152_I 241_I 0.73 0.11
59_I 30_A 0.73 0.11
203_I 164_C 0.73 0.11
156_T 278_V 0.73 0.11
129_T 160_K 0.73 0.11
146_L 237_A 0.72 0.10
72_L 191_G 0.72 0.10
139_L 270_R 0.71 0.10
132_Q 82_R 0.71 0.10
66_I 82_R 0.70 0.09
50_A 285_E 0.70 0.09
158_V 116_E 0.70 0.09
124_R 120_R 0.70 0.09
69_I 240_F 0.70 0.09
139_L 238_Q 0.70 0.09
46_I 7_I 0.70 0.09
134_V 327_I 0.70 0.09
125_A 52_N 0.70 0.09
119_L 95_S 0.69 0.09
150_A 62_V 0.69 0.09
99_G 196_L 0.69 0.09
125_A 61_S 0.69 0.09
78_F 320_Q 0.68 0.08
161_S 184_K 0.68 0.08
125_A 167_A 0.68 0.08
140_P 109_L 0.68 0.08
129_T 75_S 0.68 0.08
72_L 160_K 0.68 0.08
197_V 4_L 0.68 0.08
59_I 61_S 0.68 0.08
16_T 103_V 0.67 0.08
156_T 282_L 0.67 0.08
82_I 327_I 0.67 0.08
143_L 114_K 0.67 0.08
75_M 24_V 0.67 0.08
59_I 71_T 0.66 0.08
28_F 202_D 0.66 0.08
210_I 295_N 0.66 0.07
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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