| UniProt: | P75851 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG13705 | ||
| Length: | 263 (245) | ||
| Sequences: | 5071 | ||
| Seq/Len: | 20.70 |
| SSUC
Paralog alert: 0.71 [within 20: 0.24] - ratio of genomes with paralogs Cluster includes: ARTM ARTQ GLNP GLTJ GLTK HISM HISQ METI PHNE SSUC TAUC YECS YEHW |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 26_Q | 30_S | 4.349 | 1.00 | |
| 26_Q | 43_E | 3.053 | 1.00 | |
| 94_E | 148_R | 2.942 | 1.00 | |
| 49_F | 226_V | 2.893 | 1.00 | |
| 158_A | 172_V | 2.87 | 1.00 | |
| 164_S | 167_P | 2.786 | 1.00 | |
| 75_I | 132_A | 2.66 | 1.00 | |
| 166_I | 170_I | 2.55 | 1.00 | |
| 116_V | 129_F | 2.512 | 1.00 | |
| 67_W | 71_I | 2.384 | 1.00 | |
| 63_A | 67_W | 2.357 | 1.00 | |
| 68_R | 124_E | 2.326 | 1.00 | |
| 146_G | 180_S | 2.312 | 1.00 | |
| 120_F | 129_F | 2.254 | 1.00 | |
| 65_S | 196_L | 2.251 | 1.00 | |
| 220_Q | 223_V | 2.233 | 1.00 | |
| 212_A | 227_A | 2.132 | 1.00 | |
| 79_L | 132_A | 2.028 | 1.00 | |
| 46_V | 50_W | 1.996 | 1.00 | |
| 76_G | 135_T | 1.928 | 1.00 | |
| 77_G | 185_V | 1.915 | 1.00 | |
| 61_H | 211_L | 1.87 | 1.00 | |
| 79_L | 136_L | 1.864 | 1.00 | |
| 158_A | 163_L | 1.848 | 1.00 | |
| 143_T | 181_I | 1.839 | 1.00 | |
| 28_A | 33_W | 1.831 | 1.00 | |
| 248_L | 251_R | 1.802 | 1.00 | |
| 84_G | 88_G | 1.795 | 1.00 | |
| 79_L | 82_I | 1.793 | 1.00 | |
| 50_W | 54_A | 1.792 | 1.00 | |
| 87_S | 140_Y | 1.737 | 1.00 | |
| 71_I | 128_I | 1.694 | 1.00 | |
| 91_R | 94_E | 1.693 | 1.00 | |
| 125_S | 129_F | 1.69 | 1.00 | |
| 215_A | 223_V | 1.683 | 1.00 | |
| 136_L | 140_Y | 1.668 | 1.00 | |
| 244_L | 247_R | 1.663 | 1.00 | |
| 139_I | 188_A | 1.656 | 1.00 | |
| 167_P | 171_H | 1.635 | 1.00 | |
| 244_L | 248_L | 1.632 | 1.00 | |
| 177_A | 181_I | 1.632 | 1.00 | |
| 44_G | 47_T | 1.614 | 1.00 | |
| 165_G | 168_L | 1.595 | 1.00 | |
| 80_G | 139_I | 1.588 | 1.00 | |
| 76_G | 132_A | 1.569 | 1.00 | |
| 80_G | 140_Y | 1.567 | 1.00 | |
| 241_S | 245_L | 1.56 | 1.00 | |
| 53_S | 59_W | 1.556 | 1.00 | |
| 91_R | 95_R | 1.543 | 1.00 | |
| 43_E | 47_T | 1.521 | 1.00 | |
| 84_G | 147_I | 1.514 | 1.00 | |
| 47_T | 51_T | 1.501 | 1.00 | |
| 147_I | 173_I | 1.484 | 1.00 | |
| 150_I | 176_G | 1.481 | 1.00 | |
| 240_V | 244_L | 1.476 | 1.00 | |
| 93_G | 97_L | 1.451 | 1.00 | |
| 27_L | 31_V | 1.433 | 1.00 | |
| 23_A | 27_L | 1.417 | 1.00 | |
| 29_S | 41_S | 1.394 | 0.99 | |
| 88_G | 147_I | 1.39 | 0.99 | |
| 211_L | 227_A | 1.389 | 0.99 | |
| 157_M | 161_Y | 1.387 | 0.99 | |
| 155_V | 168_L | 1.346 | 0.99 | |
| 78_S | 82_I | 1.346 | 0.99 | |
| 41_S | 44_G | 1.331 | 0.99 | |
| 186_R | 246_E | 1.319 | 0.99 | |
| 87_S | 144_W | 1.316 | 0.99 | |
| 90_S | 93_G | 1.292 | 0.99 | |
| 48_A | 220_Q | 1.286 | 0.99 | |
| 59_W | 63_A | 1.286 | 0.99 | |
| 64_I | 206_S | 1.281 | 0.99 | |
| 64_I | 68_R | 1.278 | 0.99 | |
| 66_S | 234_L | 1.263 | 0.99 | |
| 72_G | 131_V | 1.258 | 0.99 | |
| 159_R | 168_L | 1.256 | 0.99 | |
| 146_G | 184_G | 1.253 | 0.99 | |
| 83_L | 140_Y | 1.246 | 0.98 | |
| 116_V | 126_A | 1.24 | 0.98 | |
| 116_V | 120_F | 1.221 | 0.98 | |
| 30_S | 43_E | 1.22 | 0.98 | |
| 73_F | 185_V | 1.219 | 0.98 | |
| 156_E | 159_R | 1.212 | 0.98 | |
| 186_R | 239_D | 1.208 | 0.98 | |
| 36_T | 44_G | 1.207 | 0.98 | |
| 62_L | 234_L | 1.188 | 0.98 | |
| 213_M | 216_R | 1.181 | 0.98 | |
| 87_S | 93_G | 1.173 | 0.98 | |
| 116_V | 133_L | 1.169 | 0.97 | |
| 80_G | 84_G | 1.166 | 0.97 | |
| 83_L | 136_L | 1.158 | 0.97 | |
| 73_F | 77_G | 1.155 | 0.97 | |
| 167_P | 170_I | 1.146 | 0.97 | |
| 102_Q | 105_R | 1.146 | 0.97 | |
| 77_G | 81_L | 1.135 | 0.97 | |
| 157_M | 162_G | 1.132 | 0.97 | |
| 48_A | 51_T | 1.13 | 0.97 | |
| 26_Q | 41_S | 1.107 | 0.96 | |
| 48_A | 222_D | 1.092 | 0.96 | |
| 163_L | 168_L | 1.09 | 0.96 | |
| 240_V | 243_Q | 1.086 | 0.96 | |
| 237_L | 241_S | 1.079 | 0.95 | |
| 245_L | 249_W | 1.077 | 0.95 | |
| 153_G | 156_E | 1.074 | 0.95 | |
| 89_L | 92_W | 1.072 | 0.95 | |
| 151_D | 154_L | 1.069 | 0.95 | |
| 72_G | 76_G | 1.068 | 0.95 | |
| 62_L | 208_I | 1.065 | 0.95 | |
| 134_G | 195_T | 1.064 | 0.95 | |
| 110_L | 198_V | 1.061 | 0.95 | |
| 70_L | 74_S | 1.059 | 0.95 | |
| 81_L | 181_I | 1.059 | 0.95 | |
| 84_G | 143_T | 1.058 | 0.95 | |
| 154_L | 157_M | 1.052 | 0.95 | |
| 86_I | 93_G | 1.049 | 0.94 | |
| 87_S | 97_L | 1.04 | 0.94 | |
| 80_G | 143_T | 1.039 | 0.94 | |
| 197_I | 231_Y | 1.033 | 0.94 | |
| 60_Q | 206_S | 1.031 | 0.94 | |
| 215_A | 224_V | 1.029 | 0.94 | |
| 89_L | 165_G | 1.027 | 0.94 | |
| 138_P | 191_L | 1.022 | 0.93 | |
| 142_N | 183_V | 1.015 | 0.93 | |
| 184_G | 188_A | 1.013 | 0.93 | |
| 163_L | 167_P | 1.005 | 0.93 | |
| 26_Q | 29_S | 1.005 | 0.93 | |
| 142_N | 146_G | 1 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3d31C | 2 | 0.9544 | 99.9 | 0.58 | Contact Map | 0.583 |
| 3rlfF | 1 | 0.9506 | 99.9 | 0.603 | Contact Map | 0.663 |
| 2onkC | 4 | 0.9506 | 99.9 | 0.609 | Contact Map | 0.652 |
| 3tuiA | 4 | 0.7681 | 99.9 | 0.616 | Contact Map | 0.761 |
| 3rlfG | 1 | 0.9696 | 99.8 | 0.659 | Contact Map | 0.559 |
| 3veaB | 2 | 0.2852 | 2.5 | 0.968 | Contact Map | 0.559 |
| 2kv5A | 1 | 0.1255 | 2.3 | 0.968 | Contact Map | 0.326 |
| 2mc7A | 1 | 0.1103 | 1.7 | 0.971 | Contact Map | 0 |
| 3arcK | 2 | 0.1369 | 1.4 | 0.972 | Contact Map | 0.282 |
| 4ixqK | 2 | 0.1711 | 1.2 | 0.973 | Contact Map | 0.221 |
Sequence Conservation (Image Generated using WebLogo v3)