| UniProt: | P0AER3 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12661 | ||
| Length: | 246 (225) | ||
| Sequences: | 7984 | ||
| Seq/Len: | 35.48 |
| GLTJ
Paralog alert: 0.91 [within 20: 0.54] - ratio of genomes with paralogs Cluster includes: ARTM ARTQ GLNP GLTJ GLTK HISM HISQ METI PHNE SSUC TAUC YECS YEHW |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 42_I | 119_G | 3.63 | 1.00 | |
| 114_S | 186_A | 3.493 | 1.00 | |
| 173_T | 230_M | 3.093 | 1.00 | |
| 151_T | 154_Q | 2.953 | 1.00 | |
| 207_H | 210_E | 2.922 | 1.00 | |
| 145_A | 155_A | 2.867 | 1.00 | |
| 53_L | 65_G | 2.817 | 1.00 | |
| 30_Q | 34_A | 2.722 | 1.00 | |
| 198_A | 215_I | 2.716 | 1.00 | |
| 75_V | 80_Q | 2.664 | 1.00 | |
| 50_F | 123_A | 2.526 | 1.00 | |
| 142_K | 155_A | 2.441 | 1.00 | |
| 153_P | 157_R | 2.403 | 1.00 | |
| 141_Q | 163_N | 2.396 | 1.00 | |
| 60_F | 64_L | 2.371 | 1.00 | |
| 60_F | 63_G | 2.225 | 1.00 | |
| 50_F | 127_C | 2.202 | 1.00 | |
| 51_G | 130_V | 2.18 | 1.00 | |
| 36_S | 180_V | 2.141 | 1.00 | |
| 133_A | 168_I | 2.114 | 1.00 | |
| 69_V | 127_C | 2.1 | 1.00 | |
| 228_L | 232_L | 2.024 | 1.00 | |
| 54_R | 66_T | 1.934 | 1.00 | |
| 136_S | 167_V | 1.914 | 1.00 | |
| 220_V | 224_A | 1.869 | 1.00 | |
| 142_K | 146_L | 1.805 | 1.00 | |
| 38_C | 115_M | 1.8 | 1.00 | |
| 196_A | 200_K | 1.758 | 1.00 | |
| 31_V | 34_A | 1.756 | 1.00 | |
| 36_S | 183_S | 1.753 | 1.00 | |
| 29_F | 222_I | 1.748 | 1.00 | |
| 26_W | 30_Q | 1.74 | 1.00 | |
| 46_V | 123_A | 1.738 | 1.00 | |
| 146_L | 155_A | 1.737 | 1.00 | |
| 126_V | 172_M | 1.718 | 1.00 | |
| 34_A | 111_F | 1.696 | 1.00 | |
| 84_W | 117_C | 1.689 | 1.00 | |
| 202_L | 208_A | 1.646 | 1.00 | |
| 224_A | 228_L | 1.644 | 1.00 | |
| 232_L | 235_R | 1.638 | 1.00 | |
| 55_T | 134_I | 1.612 | 1.00 | |
| 40_W | 176_M | 1.549 | 1.00 | |
| 35_L | 186_A | 1.528 | 1.00 | |
| 151_T | 155_A | 1.518 | 1.00 | |
| 75_V | 121_F | 1.514 | 1.00 | |
| 229_V | 232_L | 1.503 | 1.00 | |
| 228_L | 231_T | 1.497 | 1.00 | |
| 198_A | 211_S | 1.489 | 1.00 | |
| 59_R | 63_G | 1.486 | 1.00 | |
| 72_F | 120_L | 1.481 | 1.00 | |
| 27_S | 30_Q | 1.461 | 1.00 | |
| 111_F | 115_M | 1.46 | 1.00 | |
| 42_I | 115_M | 1.452 | 1.00 | |
| 128_E | 131_R | 1.443 | 1.00 | |
| 152_L | 156_Y | 1.441 | 1.00 | |
| 80_Q | 121_F | 1.44 | 1.00 | |
| 48_S | 130_V | 1.429 | 1.00 | |
| 55_T | 135_Q | 1.424 | 1.00 | |
| 229_V | 233_V | 1.407 | 0.99 | |
| 50_F | 65_G | 1.396 | 0.99 | |
| 109_Q | 112_L | 1.391 | 0.99 | |
| 49_F | 53_L | 1.389 | 0.99 | |
| 150_L | 154_Q | 1.381 | 0.99 | |
| 81_F | 117_C | 1.372 | 0.99 | |
| 53_L | 56_V | 1.361 | 0.99 | |
| 154_Q | 158_Y | 1.355 | 0.99 | |
| 59_R | 62_S | 1.343 | 0.99 | |
| 58_N | 63_G | 1.32 | 0.99 | |
| 186_A | 193_D | 1.265 | 0.99 | |
| 154_Q | 157_R | 1.265 | 0.99 | |
| 54_R | 128_E | 1.242 | 0.98 | |
| 126_V | 175_E | 1.213 | 0.98 | |
| 130_V | 168_I | 1.211 | 0.98 | |
| 38_C | 119_G | 1.202 | 0.98 | |
| 53_L | 61_L | 1.2 | 0.98 | |
| 31_V | 191_L | 1.196 | 0.98 | |
| 232_L | 236_K | 1.193 | 0.98 | |
| 184_A | 219_Y | 1.19 | 0.98 | |
| 64_L | 67_L | 1.189 | 0.98 | |
| 202_L | 212_F | 1.185 | 0.98 | |
| 34_A | 38_C | 1.18 | 0.98 | |
| 146_L | 152_L | 1.176 | 0.98 | |
| 47_G | 126_V | 1.168 | 0.97 | |
| 43_A | 122_T | 1.158 | 0.97 | |
| 41_I | 45_L | 1.137 | 0.97 | |
| 192_V | 196_A | 1.135 | 0.97 | |
| 45_L | 49_F | 1.135 | 0.97 | |
| 137_L | 167_V | 1.13 | 0.97 | |
| 63_G | 67_L | 1.13 | 0.97 | |
| 131_R | 135_Q | 1.113 | 0.96 | |
| 178_N | 182_N | 1.105 | 0.96 | |
| 180_V | 226_I | 1.104 | 0.96 | |
| 62_S | 66_T | 1.104 | 0.96 | |
| 142_K | 160_L | 1.088 | 0.96 | |
| 150_L | 158_Y | 1.074 | 0.95 | |
| 70_E | 224_A | 1.074 | 0.95 | |
| 145_A | 159_V | 1.073 | 0.95 | |
| 196_A | 199_G | 1.069 | 0.95 | |
| 39_A | 119_G | 1.061 | 0.95 | |
| 225_F | 229_V | 1.059 | 0.95 | |
| 129_Q | 175_E | 1.053 | 0.95 | |
| 197_Q | 200_K | 1.051 | 0.94 | |
| 111_F | 191_L | 1.051 | 0.94 | |
| 64_L | 68_Y | 1.026 | 0.94 | |
| 112_L | 116_L | 1.024 | 0.93 | |
| 217_L | 221_L | 1.022 | 0.93 | |
| 156_Y | 161_L | 1.02 | 0.93 | |
| 180_V | 222_I | 1.019 | 0.93 | |
| 81_F | 186_A | 1.007 | 0.93 | |
| 134_I | 160_L | 1.001 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3tuiA | 4 | 0.8537 | 99.9 | 0.634 | Contact Map | 0.78 |
| 2onkC | 4 | 0.935 | 99.9 | 0.655 | Contact Map | 0.589 |
| 3rlfF | 1 | 0.9593 | 99.9 | 0.656 | Contact Map | 0.624 |
| 3d31C | 2 | 0.9309 | 99.9 | 0.665 | Contact Map | 0.546 |
| 3rlfG | 1 | 0.9553 | 99.8 | 0.683 | Contact Map | 0.498 |
| 3e7lA | 4 | 0.2561 | 6.3 | 0.963 | Contact Map | 0.588 |
| 2m8gX | 1 | 0.2683 | 4.8 | 0.965 | Contact Map | 0.472 |
| 3zjzA | 4 | 0.4431 | 3.9 | 0.967 | Contact Map | 0.316 |
| 1g2hA | 1 | 0.248 | 3 | 0.968 | Contact Map | 0.381 |
| 4ltoA | 4 | 0.4756 | 2.8 | 0.969 | Contact Map | 0.572 |
Sequence Conservation (Image Generated using WebLogo v3)