| UniProt: | P0AFT2 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG14037 | ||
| Length: | 222 (214) | ||
| Sequences: | 14976 | ||
| Seq/Len: | 69.98 |
| YECS
Paralog alert: 0.93 [within 20: 0.65] - ratio of genomes with paralogs Cluster includes: ARTM ARTQ GLNP GLTJ GLTK HISM HISQ METI PHNE SSUC TAUC YECS YEHW |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 32_F | 96_S | 3.237 | 1.00 | |
| 128_T | 131_Q | 3.19 | 1.00 | |
| 184_E | 187_T | 2.998 | 1.00 | |
| 91_A | 163_A | 2.993 | 1.00 | |
| 130_W | 134_R | 2.973 | 1.00 | |
| 20_G | 24_Q | 2.905 | 1.00 | |
| 175_A | 192_A | 2.621 | 1.00 | |
| 123_A | 132_T | 2.529 | 1.00 | |
| 150_S | 207_Q | 2.453 | 1.00 | |
| 122_A | 132_T | 2.274 | 1.00 | |
| 119_W | 132_T | 2.242 | 1.00 | |
| 40_L | 100_A | 2.173 | 1.00 | |
| 205_T | 209_H | 2.134 | 1.00 | |
| 43_M | 55_A | 2.125 | 1.00 | |
| 50_P | 54_L | 2.101 | 1.00 | |
| 65_T | 70_Q | 2.082 | 1.00 | |
| 41_A | 107_L | 2.057 | 1.00 | |
| 209_H | 212_N | 1.988 | 1.00 | |
| 118_Q | 140_Q | 1.959 | 1.00 | |
| 26_S | 157_V | 1.904 | 1.00 | |
| 122_A | 136_A | 1.898 | 1.00 | |
| 40_L | 104_A | 1.894 | 1.00 | |
| 45_L | 111_I | 1.887 | 1.00 | |
| 36_L | 100_A | 1.825 | 1.00 | |
| 131_Q | 135_R | 1.823 | 1.00 | |
| 24_Q | 28_G | 1.803 | 1.00 | |
| 119_W | 123_A | 1.763 | 1.00 | |
| 50_P | 53_W | 1.74 | 1.00 | |
| 49_W | 53_W | 1.664 | 1.00 | |
| 19_A | 199_M | 1.658 | 1.00 | |
| 28_G | 92_M | 1.649 | 1.00 | |
| 59_I | 104_A | 1.645 | 1.00 | |
| 33_G | 99_T | 1.582 | 1.00 | |
| 173_R | 177_L | 1.57 | 1.00 | |
| 16_L | 20_G | 1.567 | 1.00 | |
| 24_Q | 88_I | 1.564 | 1.00 | |
| 36_L | 96_S | 1.552 | 1.00 | |
| 209_H | 213_Q | 1.55 | 1.00 | |
| 110_A | 145_A | 1.542 | 1.00 | |
| 129_P | 132_T | 1.489 | 1.00 | |
| 197_W | 201_T | 1.486 | 1.00 | |
| 205_T | 208_N | 1.481 | 1.00 | |
| 213_Q | 216_R | 1.476 | 1.00 | |
| 37_G | 103_A | 1.476 | 1.00 | |
| 30_M | 153_F | 1.474 | 1.00 | |
| 201_T | 205_T | 1.473 | 1.00 | |
| 122_A | 127_M | 1.468 | 1.00 | |
| 44_R | 56_R | 1.458 | 1.00 | |
| 21_Y | 24_Q | 1.451 | 1.00 | |
| 49_W | 52_R | 1.448 | 1.00 | |
| 103_A | 152_S | 1.444 | 1.00 | |
| 110_A | 144_V | 1.432 | 1.00 | |
| 74_I | 93_I | 1.43 | 1.00 | |
| 18_G | 174_Q | 1.41 | 1.00 | |
| 41_A | 45_L | 1.409 | 1.00 | |
| 32_F | 92_M | 1.409 | 1.00 | |
| 86_D | 89_P | 1.401 | 0.99 | |
| 35_L | 39_I | 1.397 | 0.99 | |
| 22_T | 160_T | 1.387 | 0.99 | |
| 52_R | 112_S | 1.372 | 0.99 | |
| 89_P | 93_I | 1.365 | 0.99 | |
| 128_T | 132_T | 1.352 | 0.99 | |
| 88_I | 92_M | 1.348 | 0.99 | |
| 107_L | 145_A | 1.342 | 0.99 | |
| 129_P | 133_M | 1.338 | 0.99 | |
| 127_M | 131_Q | 1.326 | 0.99 | |
| 131_Q | 134_R | 1.32 | 0.99 | |
| 113_S | 144_V | 1.308 | 0.99 | |
| 206_L | 209_H | 1.29 | 0.99 | |
| 26_S | 160_T | 1.283 | 0.99 | |
| 25_L | 88_I | 1.271 | 0.99 | |
| 161_S | 196_Y | 1.264 | 0.99 | |
| 17_K | 20_G | 1.264 | 0.99 | |
| 206_L | 210_F | 1.259 | 0.99 | |
| 45_L | 112_S | 1.259 | 0.99 | |
| 119_W | 137_I | 1.251 | 0.99 | |
| 123_A | 129_P | 1.238 | 0.98 | |
| 111_I | 137_I | 1.227 | 0.98 | |
| 25_L | 163_A | 1.218 | 0.98 | |
| 37_G | 104_A | 1.208 | 0.98 | |
| 174_Q | 177_L | 1.204 | 0.98 | |
| 36_L | 39_I | 1.203 | 0.98 | |
| 157_V | 203_L | 1.188 | 0.98 | |
| 65_T | 98_N | 1.158 | 0.97 | |
| 179_T | 185_V | 1.148 | 0.97 | |
| 38_F | 107_L | 1.146 | 0.97 | |
| 48_I | 51_V | 1.145 | 0.97 | |
| 34_L | 149_L | 1.144 | 0.97 | |
| 41_A | 111_I | 1.142 | 0.97 | |
| 116_K | 120_E | 1.139 | 0.97 | |
| 43_M | 51_V | 1.129 | 0.97 | |
| 29_G | 156_L | 1.127 | 0.97 | |
| 52_R | 56_R | 1.104 | 0.96 | |
| 39_I | 43_M | 1.098 | 0.96 | |
| 29_G | 95_L | 1.093 | 0.96 | |
| 14_F | 17_K | 1.09 | 0.96 | |
| 176_Q | 179_T | 1.089 | 0.96 | |
| 70_Q | 98_N | 1.085 | 0.96 | |
| 100_A | 104_A | 1.068 | 0.95 | |
| 175_A | 188_M | 1.065 | 0.95 | |
| 121_A | 125_I | 1.064 | 0.95 | |
| 46_S | 129_P | 1.045 | 0.94 | |
| 12_L | 16_L | 1.034 | 0.94 | |
| 17_K | 21_Y | 1.03 | 0.94 | |
| 163_A | 170_E | 1.005 | 0.93 | |
| 54_L | 58_Y | 1.004 | 0.93 | |
| 87_P | 168_V | 1.002 | 0.92 | |
| 30_M | 156_L | 1.001 | 0.92 | |
| 44_R | 104_A | 1 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3tuiA | 4 | 0.9369 | 99.9 | 0.478 | Contact Map | 0.792 |
| 2onkC | 4 | 0.973 | 99.9 | 0.489 | Contact Map | 0.642 |
| 3d31C | 2 | 0.9685 | 99.9 | 0.49 | Contact Map | 0.587 |
| 3rlfF | 1 | 0.955 | 99.9 | 0.501 | Contact Map | 0.676 |
| 3rlfG | 1 | 0.982 | 99.8 | 0.555 | Contact Map | 0.591 |
| 3w9iA | 6 | 0.8604 | 6.6 | 0.947 | Contact Map | 0.386 |
| 4dx5A | 3 | 0.8604 | 5.4 | 0.949 | Contact Map | 0.34 |
| 3j27A | 3 | 0.473 | 3.3 | 0.954 | Contact Map | 0.185 |
| 4cbfA | 2 | 0.473 | 3.3 | 0.954 | Contact Map | 0.072 |
| 4azxA | 3 | 0.473 | 3.2 | 0.955 | Contact Map | 0.085 |
Sequence Conservation (Image Generated using WebLogo v3)