| UniProt: | P0AER5 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12662 | ||
| Length: | 224 (212) | ||
| Sequences: | 8070 | ||
| Seq/Len: | 38.07 |
| GLTK
Paralog alert: 0.91 [within 20: 0.54] - ratio of genomes with paralogs Cluster includes: ARTM ARTQ GLNP GLTJ GLTK HISM HISQ METI PHNE SSUC TAUC YECS YEHW |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 33_I | 105_S | 3.519 | 1.00 | |
| 100_A | 172_V | 3.414 | 1.00 | |
| 159_L | 216_V | 3.031 | 1.00 | |
| 193_T | 196_E | 2.88 | 1.00 | |
| 137_T | 140_Q | 2.847 | 1.00 | |
| 131_A | 141_S | 2.778 | 1.00 | |
| 44_M | 56_A | 2.76 | 1.00 | |
| 184_A | 201_A | 2.695 | 1.00 | |
| 21_V | 25_K | 2.582 | 1.00 | |
| 41_L | 109_A | 2.465 | 1.00 | |
| 66_I | 71_V | 2.46 | 1.00 | |
| 128_S | 141_S | 2.351 | 1.00 | |
| 139_W | 143_K | 2.298 | 1.00 | |
| 127_Q | 149_Q | 2.284 | 1.00 | |
| 51_P | 55_F | 2.241 | 1.00 | |
| 51_P | 54_W | 2.163 | 1.00 | |
| 41_L | 113_S | 2.159 | 1.00 | |
| 42_A | 116_I | 2.077 | 1.00 | |
| 27_T | 166_F | 2.065 | 1.00 | |
| 119_G | 154_M | 2.035 | 1.00 | |
| 60_V | 113_S | 2.035 | 1.00 | |
| 214_L | 218_Y | 1.928 | 1.00 | |
| 45_R | 57_K | 1.899 | 1.00 | |
| 122_S | 153_A | 1.858 | 1.00 | |
| 17_L | 21_V | 1.777 | 1.00 | |
| 87_L | 90_S | 1.776 | 1.00 | |
| 206_F | 210_L | 1.764 | 1.00 | |
| 128_S | 132_L | 1.736 | 1.00 | |
| 29_T | 101_M | 1.731 | 1.00 | |
| 37_W | 109_A | 1.728 | 1.00 | |
| 22_I | 25_K | 1.715 | 1.00 | |
| 27_T | 169_T | 1.714 | 1.00 | |
| 20_L | 208_I | 1.702 | 1.00 | |
| 182_R | 186_T | 1.684 | 1.00 | |
| 132_L | 141_S | 1.683 | 1.00 | |
| 218_Y | 221_R | 1.677 | 1.00 | |
| 112_Y | 158_L | 1.648 | 1.00 | |
| 75_F | 103_A | 1.64 | 1.00 | |
| 188_G | 194_Q | 1.623 | 1.00 | |
| 210_L | 214_L | 1.548 | 1.00 | |
| 137_T | 141_S | 1.542 | 1.00 | |
| 46_L | 120_I | 1.529 | 1.00 | |
| 26_I | 172_V | 1.515 | 1.00 | |
| 138_H | 142_M | 1.499 | 1.00 | |
| 18_D | 21_V | 1.498 | 1.00 | |
| 31_V | 162_G | 1.495 | 1.00 | |
| 66_I | 107_F | 1.473 | 1.00 | |
| 214_L | 217_S | 1.459 | 1.00 | |
| 215_L | 218_Y | 1.455 | 1.00 | |
| 63_F | 106_M | 1.419 | 1.00 | |
| 46_L | 121_Q | 1.417 | 1.00 | |
| 50_A | 54_W | 1.415 | 1.00 | |
| 184_A | 197_M | 1.413 | 1.00 | |
| 71_V | 107_F | 1.412 | 1.00 | |
| 114_E | 117_R | 1.404 | 0.99 | |
| 33_I | 101_M | 1.39 | 0.99 | |
| 41_L | 56_A | 1.386 | 0.99 | |
| 136_M | 140_Q | 1.378 | 0.99 | |
| 215_L | 219_L | 1.372 | 0.99 | |
| 140_Q | 144_L | 1.367 | 0.99 | |
| 39_T | 116_I | 1.356 | 0.99 | |
| 40_M | 44_M | 1.35 | 0.99 | |
| 25_K | 89_L | 1.34 | 0.99 | |
| 44_M | 47_S | 1.317 | 0.99 | |
| 140_Q | 143_K | 1.304 | 0.99 | |
| 50_A | 53_A | 1.293 | 0.99 | |
| 49_F | 54_W | 1.292 | 0.99 | |
| 72_L | 103_A | 1.291 | 0.99 | |
| 172_V | 179_D | 1.258 | 0.99 | |
| 218_Y | 222_R | 1.244 | 0.98 | |
| 89_L | 101_M | 1.215 | 0.98 | |
| 22_I | 177_L | 1.211 | 0.98 | |
| 38_G | 112_Y | 1.191 | 0.98 | |
| 25_K | 29_T | 1.189 | 0.98 | |
| 34_G | 108_E | 1.182 | 0.98 | |
| 44_M | 52_V | 1.18 | 0.98 | |
| 188_G | 198_I | 1.18 | 0.98 | |
| 132_L | 138_H | 1.178 | 0.98 | |
| 55_F | 58_A | 1.177 | 0.98 | |
| 116_I | 154_M | 1.175 | 0.98 | |
| 112_Y | 161_Q | 1.165 | 0.97 | |
| 45_R | 114_E | 1.161 | 0.97 | |
| 29_T | 105_S | 1.155 | 0.97 | |
| 170_S | 205_Y | 1.152 | 0.97 | |
| 54_W | 58_A | 1.139 | 0.97 | |
| 178_A | 182_R | 1.134 | 0.97 | |
| 32_V | 36_L | 1.12 | 0.96 | |
| 164_V | 168_D | 1.113 | 0.96 | |
| 166_F | 212_A | 1.106 | 0.96 | |
| 36_L | 40_M | 1.102 | 0.96 | |
| 123_I | 153_A | 1.101 | 0.96 | |
| 131_A | 145_I | 1.087 | 0.96 | |
| 117_R | 121_Q | 1.078 | 0.95 | |
| 53_A | 57_K | 1.07 | 0.95 | |
| 136_M | 144_L | 1.066 | 0.95 | |
| 128_S | 146_I | 1.061 | 0.95 | |
| 115_I | 161_Q | 1.048 | 0.94 | |
| 203_F | 207_V | 1.041 | 0.94 | |
| 183_T | 186_T | 1.041 | 0.94 | |
| 166_F | 208_I | 1.036 | 0.94 | |
| 61_N | 210_L | 1.034 | 0.94 | |
| 182_R | 185_S | 1.022 | 0.93 | |
| 18_D | 22_I | 1.02 | 0.93 | |
| 211_S | 215_L | 1.009 | 0.93 | |
| 30_A | 105_S | 1.004 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3tuiA | 4 | 0.9241 | 99.9 | 0.629 | Contact Map | 0.786 |
| 3rlfF | 1 | 1 | 99.9 | 0.644 | Contact Map | 0.616 |
| 2onkC | 4 | 0.9866 | 99.9 | 0.645 | Contact Map | 0.575 |
| 3d31C | 2 | 0.9866 | 99.9 | 0.651 | Contact Map | 0.53 |
| 3rlfG | 1 | 0.9598 | 99.8 | 0.674 | Contact Map | 0.497 |
| 2kr6A | 1 | 0.2768 | 9.2 | 0.958 | Contact Map | 0.451 |
| 3e7lA | 4 | 0.2812 | 7.2 | 0.96 | Contact Map | 0.599 |
| 1ciiA | 1 | 0.2679 | 5.9 | 0.962 | Contact Map | 0.347 |
| 1a87A | 1 | 0.2857 | 4.9 | 0.963 | Contact Map | 0.315 |
| 1rh1A | 1 | 0.2723 | 3.7 | 0.965 | Contact Map | 0.19 |
Sequence Conservation (Image Generated using WebLogo v3)