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UGPB - UGPC
UniProt: P0AG80 - P10907
Length: 794
Sequences: 2237
Seq/Len: 2.91
I_Prob: 0.00

UGPB - sn-glycerol-3-phosphate-binding periplasmic protein UgpB
Paralog alert: 0.82 [within 20: 0.10] - ratio of genomes with paralogs
Cluster includes: CYSP MALE MODA POTD POTF SUBI THIB UGPB YCJN YDCS YNJB
UGPC - sn-glycerol-3-phosphate import ATP-binding protein UgpC
Paralog alert: 0.83 [within 20: 0.12] - ratio of genomes with paralogs
Cluster includes: ARTP BTUD CCMA CYSA DDPD DDPF DPPD DPPF FBPC FECE FEPC FHUC FTSE GLNQ GLTL HISP LIVF LIVG LOLD LPTB MALK METN MLAF MODC NIKD NIKE OPPD OPPF PHNC PHNK PHNL POTA POTG PROV PSTB SAPD SAPF SSUB SUFC TAUB THIQ UGPC YADG YBBA YBBL YCJV YDCT YECC YEHX YHDZ YNJD ZNUC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
259_F 131_R 0.66 0.00
74_A 105_G 0.66 0.00
353_A 225_K 0.62 0.00
416_Q 101_L 0.60 0.00
27_I 121_I 0.59 0.00
241_N 205_V 0.57 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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