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OPENSEQ.org

YBJI - YBJK
UniProt: P75809 - P75811
Length: 449
Sequences: 387
Seq/Len: 0.88
I_Prob: 0.00

YBJI - Flavin mononucleotide phosphatase YbjI
Paralog alert: 0.75 [within 20: 0.18] - ratio of genomes with paralogs
Cluster includes: COF MPGP SUPH YBHA YBJI YIDA YIGL
YBJK - Uncharacterized HTH-type transcriptional regulator YbjK
Paralog alert: 0.76 [within 20: 0.18] - ratio of genomes with paralogs
Cluster includes: ACRR BDCR BETI COMR ENVR NEMR RUTR SLMA UIDR YBIH YBJK YJDC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
185_L 19_E 1.40 0.00
246_R 59_A 1.04 0.00
4_K 34_I 0.99 0.00
7_A 81_A 0.96 0.00
57_E 53_D 0.95 0.00
203_W 151_E 0.94 0.00
38_I 19_E 0.91 0.00
240_V 136_Q 0.91 0.00
199_L 59_A 0.91 0.00
163_K 10_R 0.91 0.00
182_S 88_I 0.87 0.00
76_G 134_L 0.86 0.00
25_R 42_L 0.86 0.00
155_D 105_L 0.86 0.00
72_V 116_K 0.84 0.00
237_S 55_L 0.82 0.00
113_Y 55_L 0.81 0.00
189_G 44_S 0.81 0.00
77_K 139_E 0.81 0.00
85_S 83_G 0.80 0.00
102_V 15_Q 0.80 0.00
70_G 45_M 0.79 0.00
163_K 85_C 0.79 0.00
223_L 146_L 0.78 0.00
85_S 55_L 0.78 0.00
42_V 44_S 0.77 0.00
29_Q 131_Q 0.77 0.00
15_L 150_I 0.76 0.00
113_Y 39_G 0.76 0.00
203_W 48_Y 0.76 0.00
28_A 45_M 0.75 0.00
173_M 29_V 0.75 0.00
72_V 16_A 0.74 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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