| UniProt: | P0ACU2 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12301 | ||
| Length: | 212 (200) | ||
| Sequences: | 12948 | ||
| Seq/Len: | 64.74 |
| RUTR
Paralog alert: 0.77 [within 20: 0.18] - ratio of genomes with paralogs Cluster includes: ACRR BDCR BETI COMR ENVR NEMR RUTR SLMA UIDR YBIH YBJK YJDC |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 29_D | 47_L | 3.938 | 1.00 | |
| 34_F | 43_Q | 3.799 | 1.00 | |
| 42_E | 52_K | 3.556 | 1.00 | |
| 30_T | 39_T | 2.773 | 1.00 | |
| 60_P | 64_A | 2.754 | 1.00 | |
| 33_Q | 47_L | 2.575 | 1.00 | |
| 93_A | 147_G | 2.494 | 1.00 | |
| 89_A | 92_A | 2.386 | 1.00 | |
| 146_A | 150_K | 2.377 | 1.00 | |
| 31_F | 39_T | 2.329 | 1.00 | |
| 21_K | 72_Q | 2.291 | 1.00 | |
| 142_S | 160_Q | 2.232 | 1.00 | |
| 61_S | 64_A | 2.211 | 1.00 | |
| 45_A | 55_L | 2.047 | 1.00 | |
| 30_T | 47_L | 2.023 | 1.00 | |
| 51_S | 54_N | 2.011 | 1.00 | |
| 95_K | 199_E | 1.942 | 1.00 | |
| 148_W | 154_L | 1.942 | 1.00 | |
| 19_K | 22_A | 1.89 | 1.00 | |
| 20_K | 68_A | 1.859 | 1.00 | |
| 21_K | 25_S | 1.838 | 1.00 | |
| 68_A | 71_R | 1.811 | 1.00 | |
| 26_A | 47_L | 1.807 | 1.00 | |
| 30_T | 43_Q | 1.796 | 1.00 | |
| 89_A | 153_K | 1.782 | 1.00 | |
| 27_A | 31_F | 1.772 | 1.00 | |
| 25_S | 72_Q | 1.741 | 1.00 | |
| 22_A | 26_A | 1.728 | 1.00 | |
| 142_S | 146_A | 1.726 | 1.00 | |
| 146_A | 159_P | 1.721 | 1.00 | |
| 146_A | 149_V | 1.7 | 1.00 | |
| 39_T | 44_I | 1.665 | 1.00 | |
| 30_T | 34_F | 1.665 | 1.00 | |
| 28_L | 72_Q | 1.654 | 1.00 | |
| 42_E | 46_E | 1.64 | 1.00 | |
| 82_K | 140_E | 1.633 | 1.00 | |
| 148_W | 153_K | 1.591 | 1.00 | |
| 41_L | 56_L | 1.571 | 1.00 | |
| 31_F | 36_F | 1.563 | 1.00 | |
| 99_R | 199_E | 1.525 | 1.00 | |
| 204_I | 208_G | 1.502 | 1.00 | |
| 64_A | 68_A | 1.494 | 1.00 | |
| 91_L | 95_K | 1.48 | 1.00 | |
| 41_L | 55_L | 1.464 | 1.00 | |
| 147_G | 151_S | 1.442 | 1.00 | |
| 99_R | 195_N | 1.437 | 1.00 | |
| 90_P | 151_S | 1.419 | 1.00 | |
| 59_F | 68_A | 1.392 | 0.99 | |
| 20_K | 58_Y | 1.384 | 0.99 | |
| 95_K | 99_R | 1.373 | 0.99 | |
| 207_E | 210_R | 1.342 | 0.99 | |
| 72_Q | 76_I | 1.34 | 0.99 | |
| 71_R | 129_E | 1.34 | 0.99 | |
| 40_R | 43_Q | 1.338 | 0.99 | |
| 168_A | 172_H | 1.326 | 0.99 | |
| 41_L | 52_K | 1.323 | 0.99 | |
| 193_F | 196_Q | 1.312 | 0.99 | |
| 71_R | 75_D | 1.306 | 0.99 | |
| 145_I | 159_P | 1.299 | 0.99 | |
| 161_H | 200_N | 1.297 | 0.99 | |
| 25_S | 29_D | 1.294 | 0.99 | |
| 24_L | 68_A | 1.28 | 0.99 | |
| 35_G | 39_T | 1.27 | 0.99 | |
| 50_V | 54_N | 1.269 | 0.99 | |
| 24_L | 69_V | 1.263 | 0.99 | |
| 63_E | 123_A | 1.258 | 0.99 | |
| 24_L | 59_F | 1.255 | 0.99 | |
| 13_S | 16_V | 1.25 | 0.99 | |
| 35_G | 38_G | 1.243 | 0.98 | |
| 54_N | 57_Y | 1.236 | 0.98 | |
| 149_V | 159_P | 1.228 | 0.98 | |
| 43_Q | 47_L | 1.227 | 0.98 | |
| 26_A | 29_D | 1.225 | 0.98 | |
| 203_R | 207_E | 1.221 | 0.98 | |
| 43_Q | 46_E | 1.22 | 0.98 | |
| 91_L | 210_R | 1.219 | 0.98 | |
| 142_S | 159_P | 1.206 | 0.98 | |
| 165_M | 169_S | 1.202 | 0.98 | |
| 19_K | 58_Y | 1.195 | 0.98 | |
| 149_V | 156_P | 1.193 | 0.98 | |
| 34_F | 39_T | 1.171 | 0.98 | |
| 29_D | 33_Q | 1.166 | 0.97 | |
| 27_A | 65_L | 1.152 | 0.97 | |
| 51_S | 57_Y | 1.15 | 0.97 | |
| 144_L | 148_W | 1.142 | 0.97 | |
| 28_L | 69_V | 1.136 | 0.97 | |
| 147_G | 150_K | 1.133 | 0.97 | |
| 26_A | 48_A | 1.128 | 0.97 | |
| 67_I | 129_E | 1.127 | 0.97 | |
| 28_L | 32_S | 1.127 | 0.97 | |
| 190_D | 193_F | 1.113 | 0.96 | |
| 44_I | 65_L | 1.105 | 0.96 | |
| 96_E | 99_R | 1.101 | 0.96 | |
| 93_A | 144_L | 1.097 | 0.96 | |
| 139_D | 143_A | 1.076 | 0.95 | |
| 158_D | 161_H | 1.063 | 0.95 | |
| 91_L | 203_R | 1.056 | 0.95 | |
| 67_I | 71_R | 1.047 | 0.94 | |
| 56_L | 61_S | 1.044 | 0.94 | |
| 75_D | 79_A | 1.043 | 0.94 | |
| 34_F | 38_G | 1.042 | 0.94 | |
| 103_E | 107_D | 1.041 | 0.94 | |
| 92_A | 96_E | 1.036 | 0.94 | |
| 149_V | 157_I | 1.034 | 0.94 | |
| 54_N | 58_Y | 1.029 | 0.94 | |
| 138_I | 160_Q | 1.016 | 0.93 | |
| 90_P | 153_K | 1.012 | 0.93 | |
| 28_L | 73_I | 1.008 | 0.93 | |
| 91_L | 206_I | 1.005 | 0.93 | |
| 138_I | 142_S | 1.004 | 0.93 | |
| 80_P | 100_L | 1.003 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 4jykA | 2 | 1 | 100 | 0.154 | Contact Map | 0.71 |
| 1pb6A | 4 | 1 | 100 | 0.154 | Contact Map | 0.707 |
| 3npiA | 2 | 0.9858 | 100 | 0.212 | Contact Map | 0.569 |
| 2ibdA | 2 | 0.9387 | 100 | 0.214 | Contact Map | 0.74 |
| 2qtqA | 4 | 0.9858 | 100 | 0.228 | Contact Map | 0.686 |
| 3gziA | 1 | 0.9764 | 100 | 0.241 | Contact Map | 0.525 |
| 3f0cA | 1 | 0.9481 | 100 | 0.245 | Contact Map | 0.671 |
| 3dcfA | 2 | 0.9481 | 100 | 0.246 | Contact Map | 0.602 |
| 3nrgA | 5 | 0.9717 | 100 | 0.248 | Contact Map | 0.692 |
| 3himA | 2 | 0.9481 | 100 | 0.249 | Contact Map | 0.645 |
Sequence Conservation (Image Generated using WebLogo v3)