| UniProt: | P0ACU0 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12406 | ||
| Length: | 223 (208) | ||
| Sequences: | 8393 | ||
| Seq/Len: | 40.35 |
| YBIH
Paralog alert: 0.73 [within 20: 0.12] - ratio of genomes with paralogs Cluster includes: ACRR BDCR BETI COMR ENVR NEMR RUTR SLMA UIDR YBIH YBJK YJDC |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 23_A | 40_Q | 4.228 | 1.00 | |
| 28_Y | 36_E | 3.982 | 1.00 | |
| 35_R | 45_I | 3.452 | 1.00 | |
| 53_G | 57_D | 3.07 | 1.00 | |
| 27_E | 40_Q | 2.918 | 1.00 | |
| 94_A | 154_A | 2.684 | 1.00 | |
| 90_P | 93_A | 2.593 | 1.00 | |
| 96_R | 205_Q | 2.58 | 1.00 | |
| 54_S | 57_D | 2.457 | 1.00 | |
| 24_Q | 33_T | 2.397 | 1.00 | |
| 15_K | 65_W | 2.224 | 1.00 | |
| 14_K | 61_A | 2.196 | 1.00 | |
| 44_N | 47_A | 2.182 | 1.00 | |
| 149_T | 166_I | 2.161 | 1.00 | |
| 13_A | 16_Q | 2.123 | 1.00 | |
| 24_Q | 40_Q | 2.088 | 1.00 | |
| 24_Q | 36_E | 2.067 | 1.00 | |
| 21_A | 25_F | 2.059 | 1.00 | |
| 61_A | 64_Q | 2.033 | 1.00 | |
| 19_A | 65_W | 2.005 | 1.00 | |
| 34_T | 45_I | 1.974 | 1.00 | |
| 90_P | 158_C | 1.941 | 1.00 | |
| 38_A | 48_I | 1.921 | 1.00 | |
| 15_K | 19_A | 1.842 | 1.00 | |
| 174_G | 178_A | 1.825 | 1.00 | |
| 153_A | 165_M | 1.798 | 1.00 | |
| 100_L | 205_Q | 1.797 | 1.00 | |
| 20_A | 40_Q | 1.791 | 1.00 | |
| 149_T | 153_A | 1.788 | 1.00 | |
| 16_Q | 20_A | 1.78 | 1.00 | |
| 199_K | 202_L | 1.718 | 1.00 | |
| 213_L | 217_G | 1.7 | 1.00 | |
| 52_F | 61_A | 1.698 | 1.00 | |
| 155_W | 159_D | 1.694 | 1.00 | |
| 100_L | 201_E | 1.69 | 1.00 | |
| 25_F | 30_M | 1.673 | 1.00 | |
| 92_R | 96_R | 1.64 | 1.00 | |
| 216_Q | 219_S | 1.634 | 1.00 | |
| 34_T | 48_I | 1.63 | 1.00 | |
| 34_T | 49_T | 1.57 | 1.00 | |
| 96_R | 100_L | 1.566 | 1.00 | |
| 212_D | 216_Q | 1.56 | 1.00 | |
| 57_D | 61_A | 1.554 | 1.00 | |
| 22_L | 65_W | 1.554 | 1.00 | |
| 75_R | 147_H | 1.506 | 1.00 | |
| 155_W | 158_C | 1.494 | 1.00 | |
| 49_T | 54_S | 1.487 | 1.00 | |
| 92_R | 219_S | 1.48 | 1.00 | |
| 24_Q | 28_Y | 1.465 | 1.00 | |
| 171_A | 175_E | 1.463 | 1.00 | |
| 152_I | 165_M | 1.425 | 1.00 | |
| 92_R | 212_D | 1.401 | 0.99 | |
| 43_Q | 47_A | 1.4 | 0.99 | |
| 47_A | 51_Y | 1.387 | 0.99 | |
| 35_R | 39_A | 1.384 | 0.99 | |
| 25_F | 29_G | 1.376 | 0.99 | |
| 18_I | 62_C | 1.371 | 0.99 | |
| 151_L | 155_W | 1.368 | 0.99 | |
| 22_L | 62_C | 1.352 | 0.99 | |
| 160_A | 163_T | 1.345 | 0.99 | |
| 20_A | 41_A | 1.319 | 0.99 | |
| 91_D | 158_C | 1.315 | 0.99 | |
| 64_Q | 136_V | 1.293 | 0.99 | |
| 153_A | 156_T | 1.283 | 0.99 | |
| 12_Q | 15_K | 1.272 | 0.99 | |
| 44_N | 50_Y | 1.27 | 0.99 | |
| 14_K | 51_Y | 1.262 | 0.99 | |
| 20_A | 24_Q | 1.255 | 0.99 | |
| 20_A | 23_A | 1.25 | 0.99 | |
| 37_I | 58_L | 1.24 | 0.98 | |
| 17_L | 41_A | 1.237 | 0.98 | |
| 18_I | 52_F | 1.229 | 0.98 | |
| 65_W | 69_F | 1.216 | 0.98 | |
| 19_A | 23_A | 1.207 | 0.98 | |
| 33_T | 37_I | 1.206 | 0.98 | |
| 18_I | 61_A | 1.183 | 0.98 | |
| 24_Q | 32_A | 1.171 | 0.98 | |
| 25_F | 33_T | 1.166 | 0.97 | |
| 36_E | 39_A | 1.166 | 0.97 | |
| 99_I | 172_L | 1.165 | 0.97 | |
| 93_A | 97_E | 1.16 | 0.97 | |
| 23_A | 27_E | 1.151 | 0.97 | |
| 96_R | 212_D | 1.148 | 0.97 | |
| 13_A | 43_Q | 1.131 | 0.97 | |
| 30_M | 56_E | 1.128 | 0.97 | |
| 92_R | 215_L | 1.126 | 0.97 | |
| 97_E | 100_L | 1.125 | 0.97 | |
| 89_Q | 93_A | 1.122 | 0.97 | |
| 36_E | 40_Q | 1.114 | 0.96 | |
| 68_D | 72_E | 1.106 | 0.96 | |
| 22_L | 66_I | 1.103 | 0.96 | |
| 149_T | 165_M | 1.092 | 0.96 | |
| 201_E | 205_Q | 1.086 | 0.96 | |
| 156_T | 162_D | 1.083 | 0.96 | |
| 64_Q | 68_D | 1.081 | 0.95 | |
| 25_F | 59_Y | 1.072 | 0.95 | |
| 100_L | 204_N | 1.068 | 0.95 | |
| 31_N | 125_E | 1.067 | 0.95 | |
| 146_S | 150_R | 1.06 | 0.95 | |
| 30_M | 59_Y | 1.048 | 0.94 | |
| 13_A | 51_Y | 1.046 | 0.94 | |
| 196_D | 199_K | 1.044 | 0.94 | |
| 172_L | 214_I | 1.031 | 0.94 | |
| 45_I | 49_T | 1.026 | 0.94 | |
| 134_H | 138_E | 1.023 | 0.93 | |
| 22_L | 26_G | 1.023 | 0.93 | |
| 18_I | 22_L | 1.019 | 0.93 | |
| 145_H | 166_I | 1.016 | 0.93 | |
| 164_R | 167_L | 1.006 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1t33A | 2 | 0.9821 | 100 | 0.229 | Contact Map | 0.65 |
| 3npiA | 2 | 0.9283 | 100 | 0.232 | Contact Map | 0.576 |
| 4jykA | 2 | 0.9103 | 100 | 0.244 | Contact Map | 0.717 |
| 1pb6A | 4 | 0.9103 | 100 | 0.244 | Contact Map | 0.717 |
| 2ibdA | 2 | 0.8879 | 100 | 0.254 | Contact Map | 0.728 |
| 3nrgA | 5 | 0.9238 | 99.9 | 0.257 | Contact Map | 0.647 |
| 2qtqA | 4 | 0.9148 | 99.9 | 0.26 | Contact Map | 0.687 |
| 3dcfA | 2 | 0.8744 | 99.9 | 0.265 | Contact Map | 0.614 |
| 3dewA | 1 | 0.8879 | 99.9 | 0.268 | Contact Map | 0.624 |
| 3himA | 2 | 0.8834 | 99.9 | 0.268 | Contact Map | 0.595 |
Sequence Conservation (Image Generated using WebLogo v3)