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OPENSEQ.org

CSIR - LHGO
UniProt: P37338 - P37339
Length: 642
Sequences: 1102
Seq/Len: 1.87
I_Prob: 0.00

CSIR - HTH-type transcriptional repressor CsiR
Paralog alert: 0.80 [within 20: 0.20] - ratio of genomes with paralogs
Cluster includes: CSIR DGOR EXUR FADR GLCC LLDR MCBR NANR PDHR UXUR YDFH YIEP
LHGO - L-2-hydroxyglutarate oxidase LhgO
Paralog alert: 0.75 [within 20: 0.10] - ratio of genomes with paralogs
Cluster includes: DADA LHGO MTOX PUUB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
89_V 4_F 0.86 0.00
138_I 227_F 0.74 0.00
12_L 330_C 0.73 0.00
187_T 207_L 0.73 0.00
51_V 195_T 0.71 0.00
173_V 7_I 0.71 0.00
137_A 184_R 0.70 0.00
191_L 117_E 0.69 0.00
104_V 332_R 0.68 0.00
27_L 31_L 0.67 0.00
134_F 136_G 0.66 0.00
99_E 6_I 0.66 0.00
56_V 125_R 0.66 0.00
70_S 7_I 0.66 0.00
29_M 219_I 0.64 0.00
47_L 136_G 0.64 0.00
71_E 6_I 0.64 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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