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OPENSEQ.org

MENC - MENH
UniProt: P29208 - P37355
Length: 572
Sequences: 665
Seq/Len: 1.22
I_Prob: 0.00

MENC - o-succinylbenzoate synthase
Paralog alert: 0.56 [within 20: 0.15] - ratio of genomes with paralogs
Cluster includes: AEEP DGOD GUDD GUDX MENC RHMD RSPA
MENH - 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
Paralog alert: 0.80 [within 20: 0.24] - ratio of genomes with paralogs
Cluster includes: BIOH DLHH MENH MHPC PLDB RUTD YBFF YCJY YFHR YGHX YJFP
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
210_I 52_G 1.24 0.00
119_L 91_V 1.04 0.00
87_V 199_T 1.04 0.00
242_L 151_P 1.01 0.00
197_D 216_L 0.91 0.00
42_W 14_L 0.85 0.00
210_I 69_R 0.85 0.00
187_A 83_V 0.84 0.00
33_C 205_L 0.83 0.00
189_L 43_L 0.83 0.00
87_V 57_S 0.82 0.00
202_F 108_V 0.82 0.00
158_L 229_R 0.80 0.00
151_E 38_A 0.80 0.00
257_L 195_L 0.79 0.00
155_D 76_N 0.79 0.00
63_L 30_W 0.78 0.00
28_D 108_V 0.78 0.00
57_E 137_T 0.77 0.00
180_P 82_L 0.77 0.00
166_W 179_M 0.77 0.00
34_L 223_D 0.76 0.00
141_R 54_A 0.75 0.00
208_I 143_V 0.75 0.00
107_A 133_Q 0.75 0.00
191_E 204_Y 0.75 0.00
40_E 33_V 0.74 0.00
128_K 39_D 0.73 0.00
127_E 180_L 0.73 0.00
32_V 176_L 0.72 0.00
85_F 47_L 0.72 0.00
17_V 93_M 0.72 0.00
3_S 118_A 0.72 0.00
149_L 176_L 0.72 0.00
57_E 70_K 0.71 0.00
153_I 40_Y 0.71 0.00
111_N 221_A 0.70 0.00
123_D 145_A 0.70 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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