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OPENSEQ.org

LLDR - MTLD
UniProt: P0ACL7 - P09424
Length: 640
Sequences: 389
Seq/Len: 0.65
I_Prob: 0.00

LLDR - Putative L-lactate dehydrogenase operon regulatory protein
Paralog alert: 0.78 [within 20: 0.19] - ratio of genomes with paralogs
Cluster includes: CSIR DGOR EXUR FADR GLCC LLDR MCBR NANR PDHR UXUR YDFH YIEP
MTLD - Mannitol-1-phosphate 5-dehydrogenase
Paralog alert: 0.54 [within 20: 0.03] - ratio of genomes with paralogs
Cluster includes: MTLD UXAB UXUB YDFI YEIQ
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
212_D 99_I 1.17 0.00
43_V 150_V 1.08 0.00
38_A 284_P 1.07 0.00
61_L 318_G 1.02 0.00
158_S 155_S 1.02 0.00
17_R 85_T 1.01 0.00
154_I 63_V 1.00 0.00
148_V 301_L 0.98 0.00
61_L 307_L 0.97 0.00
202_V 202_T 0.97 0.00
135_T 155_S 0.95 0.00
108_I 239_I 0.94 0.00
153_A 4_L 0.89 0.00
16_V 115_L 0.88 0.00
213_G 99_I 0.88 0.00
204_D 141_D 0.86 0.00
44_S 209_V 0.85 0.00
206_I 69_I 0.84 0.00
12_V 117_I 0.84 0.00
40_Q 94_R 0.84 0.00
108_I 140_E 0.84 0.00
61_L 140_E 0.83 0.00
36_Q 73_V 0.82 0.00
154_I 38_D 0.82 0.00
37_L 298_L 0.82 0.00
42_G 71_D 0.82 0.00
31_L 278_L 0.81 0.00
12_V 48_V 0.81 0.00
14_D 42_A 0.80 0.00
16_V 102_G 0.80 0.00
20_I 237_D 0.80 0.00
126_E 155_S 0.80 0.00
202_V 199_M 0.80 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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