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OPENSEQ.org

GLCC - GLCD
UniProt: P0ACL5 - P0AEP9
Length: 753
Sequences: 680
Seq/Len: 0.99
I_Prob: 0.00

GLCC - Glc operon transcriptional activator
Paralog alert: 0.78 [within 20: 0.19] - ratio of genomes with paralogs
Cluster includes: CSIR DGOR EXUR FADR GLCC LLDR MCBR NANR PDHR UXUR YDFH YIEP
GLCD - Glycolate oxidase subunit GlcD
Paralog alert: 0.82 [within 20: 0.09] - ratio of genomes with paralogs
Cluster includes: DLD GLCD GLCE YGCU
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
215_H 59_V 1.16 0.00
42_G 70_A 0.93 0.00
124_I 71_I 0.92 0.00
121_F 292_L 0.92 0.00
29_Q 103_L 0.90 0.00
60_I 186_T 0.90 0.00
29_Q 75_C 0.87 0.00
216_V 365_G 0.85 0.00
110_R 460_F 0.80 0.00
41_L 96_L 0.80 0.00
191_R 104_L 0.79 0.00
16_I 464_G 0.79 0.00
42_G 110_K 0.79 0.00
209_V 287_A 0.78 0.00
206_Y 27_E 0.78 0.00
200_R 402_E 0.77 0.00
128_Y 29_V 0.77 0.00
134_A 433_I 0.75 0.00
221_A 394_P 0.75 0.00
117_T 311_D 0.75 0.00
18_R 29_V 0.74 0.00
220_A 385_F 0.73 0.00
161_S 111_E 0.73 0.00
97_L 66_E 0.72 0.00
36_R 455_A 0.72 0.00
39_E 309_V 0.72 0.00
30_P 456_V 0.72 0.00
205_I 325_Q 0.72 0.00
75_N 210_F 0.71 0.00
163_N 89_T 0.71 0.00
39_E 411_E 0.71 0.00
42_G 220_T 0.71 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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