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OPENSEQ.org

DEOR - PTFB1
UniProt: P0ACK5 - P69808
Length: 360
Sequences: 467
Seq/Len: 1.33
I_Prob: 0.00

DEOR - Deoxyribose operon repressor
Paralog alert: 0.83 [within 20: 0.11] - ratio of genomes with paralogs
Cluster includes: AGAR DEOR FUCR GATR GLPR SGCR SRLR ULAR YCIT YDJF YGBI YIHW
PTFB1 - Fructose-like phosphotransferase enzyme IIB component 1
Paralog alert: 0.61 [within 20: 0.18] - ratio of genomes with paralogs
Cluster includes: PTFB1 PTFB2 PTFB3
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
215_V 5_L 1.21 0.00
171_Y 30_V 1.19 0.00
165_C 23_Q 1.09 0.00
102_T 29_A 1.04 0.00
55_Y 8_L 0.99 0.00
118_T 47_Q 0.99 0.00
96_L 56_A 0.98 0.00
207_V 33_G 0.97 0.00
83_A 36_V 0.95 0.00
176_V 31_E 0.95 0.00
135_H 88_A 0.93 0.00
205_L 81_Y 0.92 0.00
58_L 5_L 0.91 0.00
95_T 23_Q 0.90 0.00
127_F 83_I 0.89 0.00
82_A 19_F 0.88 0.00
108_I 99_I 0.88 0.00
116_P 97_K 0.86 0.00
220_M 90_K 0.85 0.00
80_R 100_E 0.83 0.00
67_L 48_N 0.82 0.00
105_P 36_V 0.81 0.00
118_T 30_V 0.81 0.00
20_D 59_T 0.81 0.00
165_C 99_I 0.81 0.00
221_G 60_I 0.81 0.00
201_Q 59_T 0.80 0.00
45_H 25_L 0.80 0.00
201_Q 53_Q 0.79 0.00
151_I 85_L 0.78 0.00
212_F 5_L 0.78 0.00
118_T 23_Q 0.78 0.00
51_L 47_Q 0.78 0.00
185_F 85_L 0.78 0.00
123_S 41_Q 0.77 0.00
196_A 95_I 0.77 0.00
123_S 10_A 0.76 0.00
224_K 32_A 0.76 0.00
6_E 87_D 0.76 0.00
87_A 51_T 0.75 0.00
232_D 52_A 0.75 0.00
137_R 30_V 0.75 0.00
7_E 79_D 0.75 0.00
216_R 72_N 0.75 0.00
22_L 38_I 0.75 0.00
160_T 49_R 0.74 0.00
136_C 8_L 0.74 0.00
123_S 47_Q 0.74 0.00
102_T 37_K 0.73 0.00
171_Y 81_Y 0.73 0.00
231_S 62_I 0.72 0.00
68_L 54_D 0.72 0.00
48_P 86_Q 0.72 0.00
58_L 97_K 0.72 0.00
57_V 61_I 0.72 0.00
31_L 86_Q 0.71 0.00
232_D 35_E 0.71 0.00
47_A 48_N 0.71 0.00
6_E 100_E 0.71 0.00
92_P 70_E 0.71 0.00
104_T 15_L 0.70 0.00
81_R 53_Q 0.70 0.00
21_K 28_A 0.70 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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