| UniProt: | P32676 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11912 | ||
| Length: | 113 (103) | ||
| Sequences: | 926 | ||
| Seq/Len: | 8.99 |
| PTFB3
Paralog alert: 0.61 [within 20: 0.18] - ratio of genomes with paralogs Cluster includes: PTFB1 PTFB2 PTFB3 |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 36_S | 53_D | 3.359 | 1.00 | |
| 52_E | 56_R | 3.286 | 1.00 | |
| 5_V | 60_A | 3.273 | 1.00 | |
| 51_D | 55_R | 2.938 | 1.00 | |
| 31_E | 96_S | 2.91 | 1.00 | |
| 31_E | 92_Q | 2.637 | 1.00 | |
| 6_A | 37_I | 2.604 | 1.00 | |
| 24_L | 35_V | 2.575 | 1.00 | |
| 45_T | 48_R | 2.379 | 1.00 | |
| 30_L | 92_Q | 2.305 | 1.00 | |
| 90_E | 93_R | 2.304 | 1.00 | |
| 59_V | 98_V | 2.284 | 1.00 | |
| 86_A | 90_E | 2.214 | 1.00 | |
| 92_Q | 96_S | 2.186 | 1.00 | |
| 28_C | 35_V | 2.184 | 1.00 | |
| 3_Y | 56_R | 1.997 | 1.00 | |
| 69_A | 72_E | 1.964 | 1.00 | |
| 3_Y | 34_G | 1.869 | 1.00 | |
| 25_E | 29_L | 1.826 | 1.00 | |
| 36_S | 47_N | 1.812 | 1.00 | |
| 21_A | 25_E | 1.784 | 1.00 | |
| 27_L | 30_L | 1.775 | 1.00 | |
| 27_L | 31_E | 1.773 | 1.00 | |
| 49_L | 54_I | 1.766 | 1.00 | |
| 39_T | 47_N | 1.45 | 1.00 | |
| 96_S | 100_K | 1.386 | 0.99 | |
| 71_A | 81_Q | 1.363 | 0.99 | |
| 3_Y | 58_D | 1.356 | 0.99 | |
| 22_E | 25_E | 1.317 | 0.99 | |
| 7_V | 40_Q | 1.287 | 0.99 | |
| 9_A | 66_I | 1.24 | 0.98 | |
| 26_K | 29_L | 1.218 | 0.98 | |
| 33_W | 95_M | 1.204 | 0.97 | |
| 84_I | 87_F | 1.203 | 0.97 | |
| 85_Y | 89_R | 1.196 | 0.97 | |
| 50_A | 53_D | 1.17 | 0.97 | |
| 60_A | 77_C | 1.169 | 0.97 | |
| 9_A | 40_Q | 1.138 | 0.96 | |
| 18_Y | 84_I | 1.116 | 0.96 | |
| 48_R | 70_G | 1.11 | 0.95 | |
| 18_Y | 46_E | 1.11 | 0.95 | |
| 27_L | 92_Q | 1.096 | 0.95 | |
| 43_L | 46_E | 1.083 | 0.95 | |
| 21_A | 47_N | 1.064 | 0.94 | |
| 27_L | 91_P | 1.053 | 0.93 | |
| 5_V | 49_L | 1.046 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2r48A | 1 | 0.9292 | 100 | 0.18 | Contact Map | 0.829 |
| 2kyrA | 1 | 0.9469 | 100 | 0.328 | Contact Map | 0.679 |
| 2r4qA | 1 | 0.9292 | 100 | 0.349 | Contact Map | 0.778 |
| 2m1zA | 1 | 0.9292 | 100 | 0.371 | Contact Map | 0.62 |
| 4mgeA | 2 | 0.9115 | 99.7 | 0.609 | Contact Map | 0.564 |
| 1e2bA | 1 | 0.885 | 99.7 | 0.621 | Contact Map | 0.493 |
| 2l2qA | 1 | 0.8761 | 99.6 | 0.652 | Contact Map | 0.361 |
| 3czcA | 1 | 0.8142 | 98.8 | 0.754 | Contact Map | 0.396 |
| 1tvmA | 1 | 0.823 | 98.7 | 0.767 | Contact Map | 0.253 |
| 1vkrA | 1 | 0.885 | 98 | 0.807 | Contact Map | 0.429 |
Sequence Conservation (Image Generated using WebLogo v3)