| UniProt: | P69816 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11909 | ||
| Length: | 106 (102) | ||
| Sequences: | 904 | ||
| Seq/Len: | 8.86 |
| PTFB2
Paralog alert: 0.61 [within 20: 0.18] - ratio of genomes with paralogs Cluster includes: PTFB1 PTFB2 PTFB3 |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 36_K | 53_D | 3.445 | 1.00 | |
| 52_E | 56_S | 3.355 | 1.00 | |
| 5_I | 60_V | 3.215 | 1.00 | |
| 31_K | 96_S | 3.076 | 1.00 | |
| 51_A | 55_A | 2.943 | 1.00 | |
| 24_L | 35_V | 2.663 | 1.00 | |
| 6_A | 37_V | 2.634 | 1.00 | |
| 31_K | 92_D | 2.593 | 1.00 | |
| 45_L | 48_E | 2.444 | 1.00 | |
| 30_A | 92_D | 2.329 | 1.00 | |
| 90_R | 93_A | 2.282 | 1.00 | |
| 92_D | 96_S | 2.241 | 1.00 | |
| 28_A | 35_V | 2.145 | 1.00 | |
| 86_D | 90_R | 2.14 | 1.00 | |
| 69_K | 72_E | 2.038 | 1.00 | |
| 59_M | 98_I | 2.023 | 1.00 | |
| 3_K | 56_S | 1.999 | 1.00 | |
| 3_K | 34_E | 1.867 | 1.00 | |
| 25_E | 29_K | 1.855 | 1.00 | |
| 21_A | 25_E | 1.853 | 1.00 | |
| 49_L | 54_V | 1.839 | 1.00 | |
| 36_K | 47_N | 1.78 | 1.00 | |
| 27_A | 30_A | 1.765 | 1.00 | |
| 27_A | 31_K | 1.723 | 1.00 | |
| 3_K | 58_D | 1.516 | 1.00 | |
| 39_T | 47_N | 1.487 | 1.00 | |
| 71_E | 81_R | 1.383 | 0.99 | |
| 22_E | 25_E | 1.381 | 0.99 | |
| 7_V | 40_Q | 1.299 | 0.99 | |
| 33_W | 95_M | 1.268 | 0.98 | |
| 26_S | 29_K | 1.228 | 0.98 | |
| 9_A | 66_I | 1.225 | 0.98 | |
| 84_I | 87_A | 1.198 | 0.97 | |
| 85_S | 89_K | 1.197 | 0.97 | |
| 9_A | 40_Q | 1.173 | 0.97 | |
| 60_V | 77_K | 1.159 | 0.97 | |
| 50_T | 53_D | 1.142 | 0.96 | |
| 27_A | 92_D | 1.14 | 0.96 | |
| 43_I | 46_E | 1.096 | 0.95 | |
| 21_A | 47_N | 1.073 | 0.94 | |
| 18_Y | 46_E | 1.072 | 0.94 | |
| 80_V | 94_I | 1.072 | 0.94 | |
| 5_I | 49_L | 1.063 | 0.94 | |
| 27_A | 91_A | 1.061 | 0.94 | |
| 18_Y | 84_I | 1.036 | 0.93 | |
| 48_E | 70_F | 1.014 | 0.91 | |
| 54_V | 77_K | 1 | 0.91 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2r48A | 1 | 0.9906 | 100 | 0.155 | Contact Map | 0.841 |
| 2kyrA | 1 | 1 | 100 | 0.318 | Contact Map | 0.658 |
| 2r4qA | 1 | 0.9906 | 100 | 0.331 | Contact Map | 0.786 |
| 2m1zA | 1 | 0.9906 | 100 | 0.355 | Contact Map | 0.635 |
| 4mgeA | 2 | 0.9057 | 99.7 | 0.591 | Contact Map | 0.557 |
| 1e2bA | 1 | 0.9245 | 99.7 | 0.613 | Contact Map | 0.469 |
| 2l2qA | 1 | 0.9151 | 99.6 | 0.644 | Contact Map | 0.361 |
| 3czcA | 1 | 0.8679 | 98.8 | 0.748 | Contact Map | 0.389 |
| 1tvmA | 1 | 0.8774 | 98.7 | 0.761 | Contact Map | 0.241 |
| 1vkrA | 1 | 0.8774 | 98.1 | 0.796 | Contact Map | 0.438 |
Sequence Conservation (Image Generated using WebLogo v3)