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OPENSEQ.org

DDPC - YDDG
UniProt: P77463 - P46136
Length: 591
Sequences: 751
Seq/Len: 1.36
I_Prob: 0.00

DDPC - Probable D,D-dipeptide transport system permease protein DdpC
Paralog alert: 0.75 [within 20: 0.11] - ratio of genomes with paralogs
Cluster includes: DDPB DDPC DPPB DPPC GSIC GSID NIKB NIKC OPPB OPPC SAPB SAPC YEJB YEJE
YDDG - Aromatic amino acid exporter YddG
Paralog alert: 0.84 [within 20: 0.18] - ratio of genomes with paralogs
Cluster includes: EAMA RHTA YDDG YEDA YHBE YICL YIJE YTFF
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
222_I 278_M 1.02 0.00
165_I 281_G 0.92 0.00
129_I 109_F 0.90 0.00
109_M 281_G 0.90 0.00
244_A 44_S 0.83 0.00
109_M 171_A 0.82 0.00
214_L 274_Q 0.82 0.00
102_V 128_L 0.79 0.00
257_V 136_V 0.78 0.00
86_F 219_L 0.78 0.00
35_T 171_A 0.77 0.00
146_M 280_C 0.76 0.00
257_V 166_A 0.73 0.00
41_V 69_S 0.73 0.00
106_I 220_I 0.72 0.00
113_L 238_L 0.72 0.00
117_L 262_V 0.71 0.00
138_S 233_W 0.71 0.00
48_I 260_A 0.71 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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