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OPENSEQ.org

UBIH - XERD
UniProt: P25534 - P0A8P8
Length: 690
Sequences: 471
Seq/Len: 0.69
I_Prob: 0.00

UBIH - 2-octaprenyl-6-methoxyphenol hydroxylase
Paralog alert: 0.83 [within 20: 0.33] - ratio of genomes with paralogs
Cluster includes: CBRA FIXC UBIF UBIH VISC YDIS YGCN
XERD - Tyrosine recombinase XerD
Paralog alert: 0.88 [within 20: 0.26] - ratio of genomes with paralogs
Cluster includes: FIMB FIME INTA INTB INTD INTE INTF INTQ INTR INTS INTZ XERC XERD
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
5_I 141_V 0.98 0.00
159_V 101_A 0.89 0.00
5_I 113_L 0.84 0.00
158_L 40_L 0.83 0.00
133_V 136_K 0.83 0.00
284_V 79_V 0.83 0.00
5_I 250_F 0.81 0.00
5_I 174_N 0.81 0.00
5_I 102_S 0.78 0.00
313_L 213_Q 0.78 0.00
284_V 167_V 0.78 0.00
346_V 174_N 0.77 0.00
136_V 258_G 0.77 0.00
159_V 82_L 0.77 0.00
98_Q 264_V 0.76 0.00
332_Y 86_L 0.76 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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