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OPENSEQ.org
RUTC - RUTR
UniProt: P0AFQ5 - P0ACU2
Length: 340
Sequences: 481
Seq/Len: 1.47
I_Prob: 0.05
RUTC - Putative aminoacrylate peracid reductase RutC
Paralog alert: 0.59 [within 20: 0.10] - ratio of genomes with paralogs
Cluster includes: RIDA RUTC TDCF YJGH YOAB 		RUTR - HTH-type transcriptional regulator RutR
Paralog alert: 0.77 [within 20: 0.18] - ratio of genomes with paralogs
Cluster includes: ACRR BDCR BETI COMR ENVR NEMR RUTR SLMA UIDR YBIH YBJK YJDC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
123_I 149_V 1.41 0.05
122_T 208_G 0.93 0.01
46_D 94_I 0.91 0.01
67_G 145_I 0.89 0.01
67_G 24_L 0.82 0.01
31_S 144_L 0.82 0.01
81_T 93_A 0.78 0.01
81_T 58_Y 0.78 0.01
55_V 92_A 0.78 0.01
47_D 23_I 0.77 0.01
49_K 94_I 0.76 0.01
37_D 44_I 0.76 0.01
113_K 166_I 0.73 0.01
38_Q 94_I 0.73 0.01
74_T 202_Q 0.70 0.01
67_G 132_G 0.69 0.01
118_V 106_R 0.69 0.01
46_D 75_D 0.68 0.01
30_V 72_Q 0.68 0.01
52_T 39_T 0.68 0.01
71_A 50_V 0.67 0.01
67_G 60_P 0.67 0.01
120_I 95_K 0.67 0.01
64_E 108_Y 0.67 0.01
69_T 196_Q 0.67 0.01
21_G 97_Y 0.67 0.01
29_Y 100_L 0.67 0.01
121_A 126_L 0.67 0.01
59_I 107_D 0.66 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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