| UniProt: | P0AEB7 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG13514 | ||
| Length: | 114 (112) | ||
| Sequences: | 4343 | ||
| Seq/Len: | 38.78 |
| YOAB
Paralog alert: 0.59 [within 20: 0.09] - ratio of genomes with paralogs Cluster includes: RIDA RUTC TDCF YJGH YOAB |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 40_A | 82_A | 3.452 | 1.00 | |
| 47_D | 57_K | 2.95 | 1.00 | |
| 34_D | 37_E | 2.718 | 1.00 | |
| 62_D | 109_K | 2.696 | 1.00 | |
| 36_F | 78_K | 2.557 | 1.00 | |
| 55_S | 59_S | 2.412 | 1.00 | |
| 36_F | 75_A | 2.325 | 1.00 | |
| 40_A | 44_A | 2.261 | 1.00 | |
| 47_D | 51_E | 2.236 | 1.00 | |
| 50_L | 112_A | 2.074 | 1.00 | |
| 38_Q | 105_K | 2.026 | 1.00 | |
| 66_F | 95_V | 1.986 | 1.00 | |
| 27_V | 104_Y | 1.953 | 1.00 | |
| 65_I | 76_M | 1.94 | 1.00 | |
| 44_A | 83_W | 1.899 | 1.00 | |
| 55_S | 114_V | 1.808 | 1.00 | |
| 41_N | 45_Q | 1.8 | 1.00 | |
| 18_H | 61_L | 1.787 | 1.00 | |
| 72_D | 105_K | 1.7 | 1.00 | |
| 22_L | 55_S | 1.686 | 1.00 | |
| 63_A | 110_I | 1.682 | 1.00 | |
| 18_H | 113_A | 1.674 | 1.00 | |
| 44_A | 47_D | 1.655 | 1.00 | |
| 46_I | 110_I | 1.611 | 1.00 | |
| 17_I | 114_V | 1.599 | 1.00 | |
| 96_Q | 99_L | 1.59 | 1.00 | |
| 99_L | 103_K | 1.573 | 1.00 | |
| 56_N | 59_S | 1.455 | 1.00 | |
| 28_P | 104_Y | 1.396 | 0.99 | |
| 93_C | 109_K | 1.386 | 0.99 | |
| 40_A | 83_W | 1.376 | 0.99 | |
| 22_L | 53_Q | 1.361 | 0.99 | |
| 35_A | 39_T | 1.356 | 0.99 | |
| 67_L | 94_T | 1.35 | 0.99 | |
| 21_T | 113_A | 1.348 | 0.99 | |
| 68_A | 72_D | 1.323 | 0.99 | |
| 75_A | 78_K | 1.312 | 0.99 | |
| 41_N | 44_A | 1.31 | 0.99 | |
| 28_P | 42_T | 1.277 | 0.99 | |
| 60_I | 84_V | 1.262 | 0.99 | |
| 23_Y | 111_V | 1.253 | 0.99 | |
| 77_N | 92_R | 1.247 | 0.99 | |
| 70_K | 96_Q | 1.235 | 0.98 | |
| 67_L | 76_M | 1.23 | 0.98 | |
| 7_D | 52_K | 1.206 | 0.98 | |
| 17_I | 20_N | 1.175 | 0.98 | |
| 66_F | 93_C | 1.162 | 0.97 | |
| 36_F | 79_A | 1.161 | 0.97 | |
| 72_D | 75_A | 1.156 | 0.97 | |
| 79_A | 82_A | 1.143 | 0.97 | |
| 60_I | 110_I | 1.139 | 0.97 | |
| 64_T | 109_K | 1.134 | 0.97 | |
| 50_L | 55_S | 1.133 | 0.97 | |
| 80_W | 92_R | 1.1 | 0.96 | |
| 69_D | 72_D | 1.084 | 0.96 | |
| 17_I | 22_L | 1.066 | 0.95 | |
| 68_A | 105_K | 1.06 | 0.95 | |
| 51_E | 56_N | 1.055 | 0.95 | |
| 32_D | 37_E | 1.05 | 0.94 | |
| 57_K | 60_I | 1.023 | 0.93 | |
| 47_D | 83_W | 1.012 | 0.93 | |
| 24_Y | 49_V | 1.007 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3gtzA | 3 | 0.9912 | 100 | 0.045 | Contact Map | 0.792 |
| 3k12A | 6 | 0.9912 | 100 | 0.057 | Contact Map | 0.854 |
| 3kjjA | 12 | 0.9912 | 100 | 0.079 | Contact Map | 0.753 |
| 1xrgA | 3 | 0.9912 | 100 | 0.089 | Contact Map | 0.866 |
| 3v4dA | 6 | 0.9912 | 100 | 0.094 | Contact Map | 0.913 |
| 3m1xA | 1 | 0.9912 | 100 | 0.102 | Contact Map | 0.637 |
| 3quwA | 1 | 0.9912 | 100 | 0.106 | Contact Map | 0.721 |
| 3r0pA | 6 | 0.9912 | 100 | 0.111 | Contact Map | 0.859 |
| 3k0tA | 3 | 0.9912 | 100 | 0.112 | Contact Map | 0.826 |
| 3lmeA | 12 | 1 | 100 | 0.115 | Contact Map | 0.877 |
Sequence Conservation (Image Generated using WebLogo v3)