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OPENSEQ.org

YFCE - YFCH
UniProt: P67095 - P77775
Length: 481
Sequences: 310
Seq/Len: 0.65
I_Prob: 0.00

YFCE - Phosphodiesterase YfcE
Paralog alert: 0.27 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: YFCE
YFCH - Epimerase family protein YfcH
Paralog alert: 0.91 [within 20: 0.61] - ratio of genomes with paralogs
Cluster includes: FCL GALE GM4D HLDD QOR2 RMLB1 RMLB2 RMLD YBJS YEEZ YFCH YRAR
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
59_R 110_I 1.06 0.00
57_A 64_I 0.98 0.00
123_L 95_L 0.93 0.00
58_E 167_L 0.91 0.00
122_V 137_T 0.89 0.00
3_K 101_A 0.86 0.00
33_V 3_I 0.85 0.00
103_L 178_L 0.84 0.00
138_E 205_V 0.84 0.00
139_I 97_D 0.83 0.00
57_A 235_H 0.83 0.00
134_E 110_I 0.82 0.00
146_S 237_L 0.82 0.00
57_A 57_L 0.81 0.00
122_V 232_Q 0.81 0.00
70_V 259_G 0.80 0.00
22_E 210_W 0.80 0.00
25_A 288_L 0.80 0.00
60_L 228_V 0.79 0.00
159_G 95_L 0.79 0.00
25_A 64_I 0.79 0.00
95_L 259_G 0.79 0.00
142_F 164_G 0.79 0.00
4_L 109_L 0.78 0.00
60_L 35_Q 0.78 0.00
3_K 206_N 0.78 0.00
103_L 128_E 0.77 0.00
161_L 108_V 0.77 0.00
64_A 168_A 0.77 0.00
58_E 5_I 0.76 0.00
162_D 96_V 0.76 0.00
18_E 155_K 0.76 0.00
20_V 36_K 0.76 0.00
56_V 98_L 0.76 0.00
151_K 128_E 0.75 0.00
21_L 57_L 0.74 0.00
28_G 225_P 0.74 0.00
164_D 12_I 0.74 0.00
3_K 86_Q 0.74 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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