May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

FLAV - YBFF
UniProt: P61949 - P75736
Length: 430
Sequences: 266
Seq/Len: 0.63
I_Prob: 0.00

FLAV - Flavodoxin-1
Paralog alert: 0.64 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: FLAV FLAW MIOC YQCA
YBFF - Esterase YbfF
Paralog alert: 0.80 [within 20: 0.26] - ratio of genomes with paralogs
Cluster includes: BIOH DLHH MENH MHPC PLDB RUTD YBFF YCJY YFHR YGHX YJFP
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
171_D 1_M 1.31 0.00
50_L 92_G 1.22 0.00
159_K 19_I 1.19 0.00
114_A 72_V 1.16 0.00
132_G 186_V 1.14 0.00
158_E 50_M 1.12 0.00
168_L 58_R 1.09 0.00
6_I 194_W 1.08 0.00
114_A 152_H 1.05 0.00
3_I 111_A 1.04 0.00
18_I 236_V 1.03 0.00
132_G 43_H 1.02 0.00
18_I 106_I 1.00 0.00
132_G 149_M 1.00 0.00
79_N 231_G 1.00 0.00
40_S 59_D 0.99 0.00
25_Q 146_A 0.98 0.00
85_L 207_P 0.98 0.00
171_D 72_V 0.98 0.00
117_V 20_V 0.96 0.00
117_V 252_L 0.95 0.00
114_A 210_S 0.94 0.00
96_E 162_L 0.94 0.00
4_T 252_L 0.92 0.00
121_P 42_D 0.91 0.00
138_H 19_I 0.89 0.00
51_L 104_D 0.89 0.00
123_A 76_D 0.89 0.00
132_G 253_N 0.88 0.00
18_I 157_G 0.88 0.00
55_P 162_L 0.88 0.00
111_P 74_T 0.88 0.00
3_I 47_Q 0.88 0.00
81_K 182_Y 0.88 0.00
143_A 112_I 0.88 0.00
174_L 9_T 0.87 0.00
106_R 239_E 0.87 0.00
73_L 20_V 0.87 0.00
161_V 98_L 0.87 0.00
18_I 150_R 0.86 0.00
135_D 110_V 0.85 0.00
138_H 170_E 0.85 0.00
4_T 194_W 0.83 0.00
166_E 104_D 0.83 0.00
126_H 34_V 0.83 0.00
158_E 94_A 0.83 0.00
43_D 109_L 0.82 0.00
31_A 90_M 0.82 0.00
137_D 216_D 0.82 0.00
40_S 182_Y 0.82 0.00
5_G 71_L 0.81 0.00
117_V 85_F 0.81 0.00
115_T 18_P 0.81 0.00
117_V 77_A 0.81 0.00
99_C 245_L 0.81 0.00
45_E 236_V 0.80 0.00
33_V 29_L 0.80 0.00
32_D 44_N 0.80 0.00
167_E 40_V 0.79 0.00
4_T 155_E 0.79 0.00
52_L 19_I 0.78 0.00
61_E 131_I 0.78 0.00
105_I 47_Q 0.78 0.00
73_L 204_G 0.78 0.00
123_A 108_K 0.77 0.00
109_I 236_V 0.77 0.00
44_L 195_D 0.77 0.00
164_I 98_L 0.77 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.2472 seconds.