May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

QOR2 - YTFH
UniProt: P39315 - P0ACN2
Length: 412
Sequences: 733
Seq/Len: 1.86
I_Prob: 0.00

QOR2 - Quinone oxidoreductase 2
Paralog alert: 0.91 [within 20: 0.51] - ratio of genomes with paralogs
Cluster includes: FCL GALE GM4D HLDD QOR2 RMLB1 RMLB2 RMLD YBJS YEEZ YFCH YRAR
YTFH - Uncharacterized HTH-type transcriptional regulator YtfH
Paralog alert: 0.44 [within 20: 0.08] - ratio of genomes with paralogs
Cluster includes: YTFH
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
74_S 111_E 0.92 0.00
165_K 37_I 0.91 0.00
52_D 46_H 0.88 0.00
241_A 59_S 0.87 0.00
134_L 75_F 0.86 0.00
11_L 103_V 0.82 0.00
61_S 29_V 0.80 0.00
130_I 111_E 0.78 0.00
185_A 29_V 0.77 0.00
237_P 32_R 0.76 0.00
20_M 106_L 0.73 0.00
8_T 17_A 0.72 0.00
162_G 103_V 0.72 0.00
256_L 38_L 0.72 0.00
60_T 112_L 0.70 0.00
61_S 94_P 0.70 0.00
86_N 16_F 0.70 0.00
57_A 49_S 0.70 0.00
147_S 37_I 0.69 0.00
205_L 91_S 0.69 0.00
242_D 71_E 0.69 0.00
149_P 58_V 0.69 0.00
142_E 38_L 0.69 0.00
223_S 75_F 0.68 0.00
209_L 70_L 0.68 0.00
89_N 38_L 0.68 0.00
255_G 37_I 0.68 0.00
201_T 103_V 0.67 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.1253 seconds.