| UniProt: | P0ACN2 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12508 | ||
| Length: | 126 (110) | ||
| Sequences: | 3859 | ||
| Seq/Len: | 35.08 |
| YTFH
Paralog alert: 0.44 [within 20: 0.08] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 83_V | 87_H | 3.07 | 1.00 | |
| 77_N | 91_S | 2.848 | 1.00 | |
| 61_K | 65_Q | 2.81 | 1.00 | |
| 79_I | 91_S | 2.65 | 1.00 | |
| 98_Q | 112_L | 2.615 | 1.00 | |
| 52_R | 60_E | 2.524 | 1.00 | |
| 77_N | 93_T | 2.385 | 1.00 | |
| 42_R | 100_S | 2.167 | 1.00 | |
| 81_Y | 89_E | 2.112 | 1.00 | |
| 41_L | 76_L | 2.094 | 1.00 | |
| 40_A | 54_K | 2.048 | 1.00 | |
| 37_I | 66_S | 2.023 | 1.00 | |
| 81_Y | 87_H | 2.004 | 1.00 | |
| 45_T | 91_S | 1.812 | 1.00 | |
| 64_A | 68_Q | 1.74 | 1.00 | |
| 101_E | 105_A | 1.694 | 1.00 | |
| 25_V | 106_L | 1.686 | 1.00 | |
| 95_L | 113_N | 1.616 | 1.00 | |
| 62_M | 65_Q | 1.609 | 1.00 | |
| 94_P | 97_E | 1.595 | 1.00 | |
| 41_L | 51_L | 1.577 | 1.00 | |
| 102_K | 105_A | 1.576 | 1.00 | |
| 92_L | 96_G | 1.502 | 1.00 | |
| 98_Q | 109_W | 1.469 | 1.00 | |
| 34_G | 66_S | 1.435 | 1.00 | |
| 78_R | 88_V | 1.426 | 1.00 | |
| 34_G | 69_A | 1.414 | 1.00 | |
| 68_Q | 71_E | 1.402 | 0.99 | |
| 97_E | 100_S | 1.402 | 0.99 | |
| 46_H | 54_K | 1.348 | 0.99 | |
| 47_R | 89_E | 1.342 | 0.99 | |
| 95_L | 98_Q | 1.339 | 0.99 | |
| 25_V | 110_I | 1.314 | 0.99 | |
| 79_I | 89_E | 1.313 | 0.99 | |
| 107_A | 111_E | 1.313 | 0.99 | |
| 81_Y | 86_P | 1.261 | 0.99 | |
| 38_L | 92_L | 1.23 | 0.98 | |
| 75_F | 99_V | 1.229 | 0.98 | |
| 48_F | 64_A | 1.226 | 0.98 | |
| 31_S | 69_A | 1.214 | 0.98 | |
| 31_S | 66_S | 1.205 | 0.98 | |
| 60_E | 64_A | 1.2 | 0.98 | |
| 28_H | 73_D | 1.161 | 0.97 | |
| 98_Q | 113_N | 1.159 | 0.97 | |
| 82_P | 85_P | 1.159 | 0.97 | |
| 80_A | 85_P | 1.155 | 0.97 | |
| 105_A | 108_D | 1.117 | 0.96 | |
| 75_F | 96_G | 1.106 | 0.96 | |
| 71_E | 76_L | 1.096 | 0.96 | |
| 81_Y | 85_P | 1.093 | 0.96 | |
| 31_S | 34_G | 1.059 | 0.95 | |
| 33_W | 58_V | 1.036 | 0.94 | |
| 58_V | 63_L | 1.027 | 0.94 | |
| 49_S | 53_R | 1.026 | 0.94 | |
| 28_H | 75_F | 1.016 | 0.93 | |
| 45_T | 89_E | 1.016 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 4gcvA | 12 | 0.9206 | 99.9 | 0.404 | Contact Map | 0.758 |
| 1yyvA | 2 | 1 | 99.7 | 0.489 | Contact Map | 0.706 |
| 4a5nA | 4 | 0.9524 | 99.7 | 0.501 | Contact Map | 0.768 |
| 4hqeA | 2 | 0.881 | 99.7 | 0.511 | Contact Map | 0.823 |
| 2fswA | 2 | 0.8492 | 99.7 | 0.521 | Contact Map | 0.892 |
| 2hztA | 4 | 0.8492 | 99.7 | 0.527 | Contact Map | 0.842 |
| 1z7uA | 2 | 0.8889 | 99.7 | 0.531 | Contact Map | 0.755 |
| 2f2eA | 2 | 0.9206 | 99.6 | 0.536 | Contact Map | 0.75 |
| 4hw0A | 3 | 0.8016 | 99.6 | 0.558 | Contact Map | 0.762 |
| 3df8A | 1 | 0.8492 | 99.5 | 0.581 | Contact Map | 0.622 |
Sequence Conservation (Image Generated using WebLogo v3)