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OPENSEQ.org

GPH - RPE
UniProt: P32662 - P0AG07
Length: 477
Sequences: 346
Seq/Len: 0.77
I_Prob: 0.00

GPH - Phosphoglycolate phosphatase
Paralog alert: 0.89 [within 20: 0.11] - ratio of genomes with paralogs
Cluster includes: GPH PGMB YFBT YIEH YIGB YIHX YJJG YNIC YQAB YRFG
RPE - Ribulose-phosphate 3-epimerase
Paralog alert: 0.20 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: ALSE RPE SGCE
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
132_L 3_Q 1.19 0.00
189_F 22_T 1.17 0.00
238_A 136_I 1.16 0.00
20_D 14_D 1.08 0.00
180_M 83_A 1.08 0.00
49_W 56_L 1.08 0.00
57_L 55_S 1.06 0.00
205_C 3_Q 0.96 0.00
186_Q 171_D 0.95 0.00
209_G 32_V 0.95 0.00
180_M 80_D 0.93 0.00
58_M 48_I 0.91 0.00
214_Y 47_T 0.91 0.00
130_L 133_L 0.90 0.00
24_G 22_T 0.88 0.00
205_C 160_E 0.88 0.00
232_I 136_I 0.87 0.00
201_K 22_T 0.87 0.00
106_A 107_K 0.87 0.00
22_A 56_L 0.87 0.00
30_D 58_N 0.86 0.00
102_Y 196_F 0.85 0.00
131_G 176_V 0.85 0.00
99_D 23_A 0.85 0.00
12_F 117_F 0.84 0.00
177_A 207_D 0.84 0.00
208_V 108_E 0.83 0.00
53_G 55_S 0.83 0.00
49_W 60_G 0.83 0.00
121_G 218_E 0.83 0.00
11_A 180_V 0.83 0.00
226_D 219_L 0.82 0.00
161_D 15_F 0.82 0.00
208_V 128_Y 0.81 0.00
90_Q 176_V 0.81 0.00
85_I 54_K 0.81 0.00
218_E 149_S 0.80 0.00
42_G 32_V 0.80 0.00
206_P 160_E 0.80 0.00
23_P 90_T 0.79 0.00
219_A 176_V 0.79 0.00
139_P 22_T 0.78 0.00
137_P 215_M 0.78 0.00
225_P 56_L 0.78 0.00
49_W 87_S 0.77 0.00
199_A 57_R 0.77 0.00
232_I 21_D 0.77 0.00
172_P 163_R 0.77 0.00
29_V 90_T 0.76 0.00
152_K 167_E 0.76 0.00
49_W 173_R 0.76 0.00
116_V 107_K 0.76 0.00
159_G 213_D 0.76 0.00
227_V 112_K 0.76 0.00
42_G 88_I 0.76 0.00
145_L 200_S 0.76 0.00
131_G 197_V 0.75 0.00
157_V 71_V 0.75 0.00
225_P 158_L 0.75 0.00
231_S 22_T 0.74 0.00
97_L 171_D 0.74 0.00
184_P 163_R 0.74 0.00
193_S 45_N 0.74 0.00
146_E 167_E 0.74 0.00
225_P 104_Q 0.73 0.00
112_L 20_E 0.73 0.00
197_I 32_V 0.73 0.00
50_I 65_I 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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