| UniProt: | P77247 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG13988 | ||
| Length: | 222 (211) | ||
| Sequences: | 12341 | ||
| Seq/Len: | 58.49 |
| YNIC
Paralog alert: 0.91 [within 20: 0.14] - ratio of genomes with paralogs Cluster includes: GPH PGMB YFBT YIEH YIGB YIHX YJJG YNIC YQAB YRFG |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 8_L | 167_T | 4.064 | 1.00 | |
| 172_E | 177_G | 3.122 | 1.00 | |
| 156_D | 160_K | 2.897 | 1.00 | |
| 181_S | 188_S | 2.872 | 1.00 | |
| 127_T | 132_R | 2.705 | 1.00 | |
| 146_Y | 150_H | 2.611 | 1.00 | |
| 182_K | 206_D | 2.496 | 1.00 | |
| 119_L | 123_E | 2.48 | 1.00 | |
| 102_A | 134_S | 2.452 | 1.00 | |
| 9_A | 163_V | 2.429 | 1.00 | |
| 158_A | 168_C | 2.375 | 1.00 | |
| 156_D | 159_A | 2.368 | 1.00 | |
| 115_S | 122_L | 2.301 | 1.00 | |
| 110_L | 136_D | 2.259 | 1.00 | |
| 98_R | 102_A | 2.158 | 1.00 | |
| 210_S | 214_E | 2.112 | 1.00 | |
| 35_S | 78_R | 2.092 | 1.00 | |
| 105_K | 136_D | 2.083 | 1.00 | |
| 119_L | 143_K | 2.075 | 1.00 | |
| 178_M | 188_S | 2.052 | 1.00 | |
| 7_I | 187_R | 2.045 | 1.00 | |
| 179_I | 183_A | 2.007 | 1.00 | |
| 114_A | 153_V | 1.963 | 1.00 | |
| 146_Y | 152_Q | 1.942 | 1.00 | |
| 158_A | 186_M | 1.94 | 1.00 | |
| 169_V | 189_I | 1.94 | 1.00 | |
| 112_G | 137_A | 1.912 | 1.00 | |
| 12_F | 111_V | 1.899 | 1.00 | |
| 164_D | 167_T | 1.871 | 1.00 | |
| 11_I | 114_A | 1.789 | 1.00 | |
| 137_A | 160_K | 1.787 | 1.00 | |
| 187_R | 206_D | 1.73 | 1.00 | |
| 111_V | 135_F | 1.699 | 1.00 | |
| 31_D | 82_R | 1.698 | 1.00 | |
| 97_V | 212_L | 1.679 | 1.00 | |
| 10_A | 109_L | 1.662 | 1.00 | |
| 158_A | 165_P | 1.643 | 1.00 | |
| 105_K | 134_S | 1.629 | 1.00 | |
| 170_A | 181_S | 1.608 | 1.00 | |
| 9_A | 161_L | 1.545 | 1.00 | |
| 10_A | 171_L | 1.54 | 1.00 | |
| 163_V | 168_C | 1.522 | 1.00 | |
| 11_I | 157_C | 1.482 | 1.00 | |
| 103_L | 107_Q | 1.474 | 1.00 | |
| 192_P | 210_S | 1.453 | 1.00 | |
| 112_G | 161_L | 1.421 | 1.00 | |
| 175_V | 179_I | 1.404 | 0.99 | |
| 96_G | 99_E | 1.378 | 0.99 | |
| 189_I | 209_L | 1.371 | 0.99 | |
| 56_M | 59_D | 1.369 | 0.99 | |
| 10_A | 104_C | 1.362 | 0.99 | |
| 14_M | 122_L | 1.344 | 0.99 | |
| 14_M | 19_I | 1.34 | 0.99 | |
| 211_S | 214_E | 1.339 | 0.99 | |
| 35_S | 82_R | 1.322 | 0.99 | |
| 123_E | 132_R | 1.309 | 0.99 | |
| 18_L | 97_V | 1.274 | 0.99 | |
| 168_C | 186_M | 1.268 | 0.99 | |
| 36_L | 78_R | 1.263 | 0.99 | |
| 17_L | 171_L | 1.262 | 0.99 | |
| 82_R | 85_S | 1.255 | 0.99 | |
| 78_R | 82_R | 1.246 | 0.98 | |
| 11_I | 170_A | 1.241 | 0.98 | |
| 71_S | 74_E | 1.238 | 0.98 | |
| 9_A | 168_C | 1.232 | 0.98 | |
| 93_L | 131_L | 1.222 | 0.98 | |
| 139_A | 160_K | 1.206 | 0.98 | |
| 31_D | 35_S | 1.206 | 0.98 | |
| 151_P | 155_L | 1.204 | 0.98 | |
| 122_L | 140_S | 1.198 | 0.98 | |
| 77_E | 81_A | 1.189 | 0.98 | |
| 154_Y | 170_A | 1.174 | 0.98 | |
| 11_I | 168_C | 1.172 | 0.98 | |
| 103_L | 106_E | 1.162 | 0.97 | |
| 154_Y | 186_M | 1.16 | 0.97 | |
| 139_A | 157_C | 1.153 | 0.97 | |
| 114_A | 157_C | 1.146 | 0.97 | |
| 99_E | 213_T | 1.14 | 0.97 | |
| 115_S | 140_S | 1.133 | 0.97 | |
| 189_I | 207_V | 1.123 | 0.97 | |
| 152_Q | 156_D | 1.122 | 0.97 | |
| 94_L | 193_A | 1.121 | 0.97 | |
| 154_Y | 172_E | 1.116 | 0.96 | |
| 102_A | 106_E | 1.103 | 0.96 | |
| 15_D | 21_S | 1.087 | 0.96 | |
| 113_L | 135_F | 1.083 | 0.96 | |
| 123_E | 127_T | 1.078 | 0.95 | |
| 32_V | 36_L | 1.072 | 0.95 | |
| 182_K | 188_S | 1.07 | 0.95 | |
| 100_A | 212_L | 1.066 | 0.95 | |
| 14_M | 113_L | 1.055 | 0.95 | |
| 178_M | 190_V | 1.045 | 0.94 | |
| 192_P | 208_K | 1.044 | 0.94 | |
| 74_E | 78_R | 1.044 | 0.94 | |
| 137_A | 161_L | 1.044 | 0.94 | |
| 7_I | 169_V | 1.043 | 0.94 | |
| 170_A | 186_M | 1.042 | 0.94 | |
| 104_C | 109_L | 1.038 | 0.94 | |
| 78_R | 81_A | 1.038 | 0.94 | |
| 99_E | 102_A | 1.029 | 0.94 | |
| 27_R | 31_D | 1.024 | 0.93 | |
| 93_L | 98_R | 1.019 | 0.93 | |
| 178_M | 205_A | 1.002 | 0.92 | |
| 9_A | 110_L | 1.001 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1te2A | 2 | 1 | 100 | 0.247 | Contact Map | 0.869 |
| 4eekA | 1 | 0.973 | 100 | 0.265 | Contact Map | 0.774 |
| 4gibA | 2 | 0.964 | 100 | 0.273 | Contact Map | 0.794 |
| 1swvA | 2 | 0.982 | 100 | 0.278 | Contact Map | 0.82 |
| 3l5kA | 1 | 0.9775 | 100 | 0.279 | Contact Map | 0.784 |
| 3nasA | 2 | 0.9414 | 100 | 0.281 | Contact Map | 0.752 |
| 3iruA | 2 | 0.9865 | 100 | 0.282 | Contact Map | 0.702 |
| 3d6jA | 1 | 0.9775 | 100 | 0.283 | Contact Map | 0.861 |
| 3s6jA | 6 | 0.9775 | 100 | 0.284 | Contact Map | 0.72 |
| 4g9bA | 1 | 0.9459 | 100 | 0.286 | Contact Map | 0.788 |
Sequence Conservation (Image Generated using WebLogo v3)