| UniProt: | P64636 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12928 | ||
| Length: | 222 (210) | ||
| Sequences: | 11884 | ||
| Seq/Len: | 56.59 |
| YRFG
Paralog alert: 0.93 [within 20: 0.22] - ratio of genomes with paralogs Cluster includes: GPH PGMB YFBT YIEH YIGB YIHX YJJG YNIC YQAB YRFG |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 11_D | 168_R | 4.352 | 1.00 | |
| 173_D | 178_I | 3.344 | 1.00 | |
| 128_E | 133_D | 2.978 | 1.00 | |
| 157_A | 161_A | 2.964 | 1.00 | |
| 147_Y | 151_D | 2.643 | 1.00 | |
| 12_T | 164_L | 2.571 | 1.00 | |
| 120_P | 124_A | 2.559 | 1.00 | |
| 183_A | 208_H | 2.522 | 1.00 | |
| 103_E | 135_H | 2.519 | 1.00 | |
| 111_Q | 137_D | 2.493 | 1.00 | |
| 157_A | 160_E | 2.48 | 1.00 | |
| 116_T | 123_L | 2.459 | 1.00 | |
| 182_A | 190_C | 2.391 | 1.00 | |
| 159_A | 169_T | 2.354 | 1.00 | |
| 99_I | 103_E | 2.352 | 1.00 | |
| 120_P | 144_T | 2.337 | 1.00 | |
| 212_N | 216_R | 2.189 | 1.00 | |
| 106_K | 137_D | 2.16 | 1.00 | |
| 115_L | 154_L | 2.093 | 1.00 | |
| 10_V | 188_R | 2.052 | 1.00 | |
| 180_D | 184_Q | 2.05 | 1.00 | |
| 159_A | 187_I | 2.046 | 1.00 | |
| 113_I | 138_L | 2.031 | 1.00 | |
| 15_L | 112_R | 1.918 | 1.00 | |
| 165_K | 168_R | 1.907 | 1.00 | |
| 147_Y | 153_R | 1.899 | 1.00 | |
| 138_L | 161_A | 1.893 | 1.00 | |
| 14_L | 115_L | 1.863 | 1.00 | |
| 98_T | 214_Y | 1.757 | 1.00 | |
| 13_V | 110_K | 1.755 | 1.00 | |
| 171_F | 182_A | 1.729 | 1.00 | |
| 106_K | 135_H | 1.721 | 1.00 | |
| 112_R | 136_L | 1.717 | 1.00 | |
| 179_L | 190_C | 1.688 | 1.00 | |
| 188_R | 208_H | 1.684 | 1.00 | |
| 13_V | 172_I | 1.673 | 1.00 | |
| 159_A | 166_A | 1.603 | 1.00 | |
| 164_L | 169_T | 1.595 | 1.00 | |
| 104_A | 108_S | 1.582 | 1.00 | |
| 12_T | 162_T | 1.578 | 1.00 | |
| 14_L | 158_V | 1.568 | 1.00 | |
| 13_V | 105_L | 1.539 | 1.00 | |
| 113_I | 162_T | 1.524 | 1.00 | |
| 213_D | 216_R | 1.52 | 1.00 | |
| 104_A | 218_I | 1.486 | 1.00 | |
| 194_T | 212_N | 1.481 | 1.00 | |
| 176_E | 180_D | 1.481 | 1.00 | |
| 68_Y | 71_D | 1.407 | 0.99 | |
| 97_D | 100_P | 1.404 | 0.99 | |
| 17_M | 22_L | 1.399 | 0.99 | |
| 169_T | 187_I | 1.355 | 0.99 | |
| 20_T | 172_I | 1.353 | 0.99 | |
| 124_A | 133_D | 1.343 | 0.99 | |
| 170_L | 191_L | 1.337 | 0.99 | |
| 21_L | 98_T | 1.329 | 0.99 | |
| 12_T | 169_T | 1.278 | 0.99 | |
| 104_A | 107_A | 1.277 | 0.99 | |
| 140_L | 158_V | 1.274 | 0.99 | |
| 123_L | 141_S | 1.266 | 0.99 | |
| 17_M | 123_L | 1.257 | 0.99 | |
| 140_L | 161_A | 1.257 | 0.99 | |
| 182_A | 189_Y | 1.253 | 0.99 | |
| 101_F | 214_Y | 1.241 | 0.98 | |
| 103_E | 107_A | 1.23 | 0.98 | |
| 114_L | 136_L | 1.228 | 0.98 | |
| 152_Q | 156_H | 1.21 | 0.98 | |
| 94_L | 132_L | 1.203 | 0.98 | |
| 17_M | 114_L | 1.199 | 0.98 | |
| 155_W | 173_D | 1.198 | 0.98 | |
| 14_L | 169_T | 1.197 | 0.98 | |
| 38_T | 42_K | 1.189 | 0.98 | |
| 124_A | 128_E | 1.183 | 0.98 | |
| 14_L | 171_F | 1.162 | 0.97 | |
| 100_P | 215_R | 1.158 | 0.97 | |
| 106_K | 112_R | 1.152 | 0.97 | |
| 18_D | 24_L | 1.151 | 0.97 | |
| 101_F | 218_I | 1.15 | 0.97 | |
| 179_L | 192_G | 1.147 | 0.97 | |
| 153_R | 157_A | 1.145 | 0.97 | |
| 155_W | 187_I | 1.127 | 0.97 | |
| 155_W | 171_F | 1.126 | 0.97 | |
| 177_A | 180_D | 1.124 | 0.97 | |
| 94_L | 99_I | 1.116 | 0.96 | |
| 146_G | 153_R | 1.088 | 0.96 | |
| 131_G | 134_A | 1.078 | 0.95 | |
| 105_L | 110_K | 1.077 | 0.95 | |
| 116_T | 141_S | 1.075 | 0.95 | |
| 211_L | 217_L | 1.075 | 0.95 | |
| 171_F | 187_I | 1.068 | 0.95 | |
| 39_W | 43_N | 1.06 | 0.95 | |
| 100_P | 103_E | 1.06 | 0.95 | |
| 37_E | 41_A | 1.05 | 0.94 | |
| 199_G | 203_K | 1.048 | 0.94 | |
| 181_A | 185_F | 1.043 | 0.94 | |
| 14_L | 162_T | 1.043 | 0.94 | |
| 138_L | 162_T | 1.04 | 0.94 | |
| 179_L | 207_R | 1.035 | 0.94 | |
| 120_P | 141_S | 1.035 | 0.94 | |
| 12_T | 111_Q | 1.03 | 0.94 | |
| 38_T | 41_A | 1.026 | 0.94 | |
| 42_K | 84_M | 1.016 | 0.93 | |
| 156_H | 160_E | 1.015 | 0.93 | |
| 10_V | 170_L | 1.011 | 0.93 | |
| 125_V | 129_H | 1.008 | 0.93 | |
| 115_L | 158_V | 1.003 | 0.93 | |
| 194_T | 210_S | 1.001 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 4eekA | 1 | 0.955 | 100 | 0.295 | Contact Map | 0.755 |
| 2om6A | 2 | 0.9459 | 100 | 0.3 | Contact Map | 0.823 |
| 3s6jA | 6 | 0.9324 | 100 | 0.304 | Contact Map | 0.715 |
| 1te2A | 2 | 0.9505 | 100 | 0.306 | Contact Map | 0.856 |
| 3l5kA | 1 | 0.9459 | 100 | 0.311 | Contact Map | 0.774 |
| 3umbA | 1 | 0.9459 | 100 | 0.314 | Contact Map | 0.775 |
| 1swvA | 2 | 0.9369 | 100 | 0.315 | Contact Map | 0.812 |
| 3qxgA | 2 | 0.9459 | 100 | 0.321 | Contact Map | 0.802 |
| 3iruA | 2 | 0.9505 | 100 | 0.321 | Contact Map | 0.698 |
| 2pibA | 2 | 0.9054 | 100 | 0.321 | Contact Map | 0.836 |
Sequence Conservation (Image Generated using WebLogo v3)