| UniProt: | P77366 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG13918 | ||
| Length: | 219 (206) | ||
| Sequences: | 11832 | ||
| Seq/Len: | 57.44 |
| PGMB
Paralog alert: 0.91 [within 20: 0.14] - ratio of genomes with paralogs Cluster includes: GPH PGMB YFBT YIEH YIGB YIHX YJJG YNIC YQAB YRFG |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 4_Q | 166_A | 4.117 | 1.00 | |
| 155_A | 159_G | 3.01 | 1.00 | |
| 180_I | 187_S | 2.94 | 1.00 | |
| 171_E | 176_G | 2.922 | 1.00 | |
| 126_A | 131_R | 2.84 | 1.00 | |
| 145_N | 149_D | 2.677 | 1.00 | |
| 5_G | 162_V | 2.515 | 1.00 | |
| 103_A | 133_F | 2.471 | 1.00 | |
| 157_C | 167_C | 2.425 | 1.00 | |
| 155_A | 158_A | 2.396 | 1.00 | |
| 111_S | 135_T | 2.335 | 1.00 | |
| 99_R | 103_A | 2.234 | 1.00 | |
| 181_N | 198_Q | 2.156 | 1.00 | |
| 106_R | 135_T | 2.133 | 1.00 | |
| 116_S | 121_A | 2.117 | 1.00 | |
| 31_E | 77_R | 2.086 | 1.00 | |
| 177_I | 187_S | 2.073 | 1.00 | |
| 178_D | 182_A | 2.067 | 1.00 | |
| 3_L | 186_R | 2.044 | 1.00 | |
| 115_A | 152_I | 1.999 | 1.00 | |
| 168_I | 188_V | 1.975 | 1.00 | |
| 202_P | 206_S | 1.966 | 1.00 | |
| 8_F | 112_V | 1.962 | 1.00 | |
| 157_C | 185_M | 1.956 | 1.00 | |
| 113_G | 136_F | 1.948 | 1.00 | |
| 145_N | 151_E | 1.924 | 1.00 | |
| 163_P | 166_A | 1.882 | 1.00 | |
| 136_F | 159_G | 1.783 | 1.00 | |
| 98_I | 204_T | 1.726 | 1.00 | |
| 7_I | 115_A | 1.721 | 1.00 | |
| 106_R | 133_F | 1.702 | 1.00 | |
| 112_V | 134_F | 1.688 | 1.00 | |
| 169_G | 180_I | 1.681 | 1.00 | |
| 6_V | 110_I | 1.662 | 1.00 | |
| 157_C | 164_P | 1.632 | 1.00 | |
| 27_Q | 81_L | 1.632 | 1.00 | |
| 6_V | 170_I | 1.58 | 1.00 | |
| 5_G | 160_L | 1.576 | 1.00 | |
| 37_D | 40_F | 1.567 | 1.00 | |
| 162_V | 167_C | 1.566 | 1.00 | |
| 104_D | 108_Q | 1.498 | 1.00 | |
| 113_G | 160_L | 1.498 | 1.00 | |
| 186_R | 198_Q | 1.497 | 1.00 | |
| 7_I | 156_A | 1.464 | 1.00 | |
| 6_V | 105_L | 1.439 | 1.00 | |
| 191_G | 202_P | 1.438 | 1.00 | |
| 67_N | 70_E | 1.412 | 1.00 | |
| 13_V | 170_I | 1.402 | 0.99 | |
| 174_Q | 178_D | 1.38 | 0.99 | |
| 51_E | 54_R | 1.365 | 0.99 | |
| 10_L | 121_A | 1.358 | 0.99 | |
| 14_I | 98_I | 1.323 | 0.99 | |
| 122_P | 131_R | 1.317 | 0.99 | |
| 27_Q | 31_E | 1.307 | 0.99 | |
| 31_E | 81_L | 1.304 | 0.99 | |
| 94_V | 130_L | 1.303 | 0.99 | |
| 97_G | 100_S | 1.29 | 0.99 | |
| 167_C | 185_M | 1.285 | 0.99 | |
| 10_L | 15_T | 1.282 | 0.99 | |
| 138_A | 159_G | 1.269 | 0.99 | |
| 7_I | 169_G | 1.262 | 0.99 | |
| 32_I | 77_R | 1.234 | 0.98 | |
| 81_L | 84_H | 1.222 | 0.98 | |
| 203_S | 206_S | 1.22 | 0.98 | |
| 150_P | 154_L | 1.218 | 0.98 | |
| 177_I | 189_G | 1.211 | 0.98 | |
| 5_G | 167_C | 1.209 | 0.98 | |
| 153_F | 169_G | 1.204 | 0.98 | |
| 70_E | 73_Q | 1.204 | 0.98 | |
| 7_I | 167_C | 1.2 | 0.98 | |
| 153_F | 185_M | 1.197 | 0.98 | |
| 104_D | 107_A | 1.191 | 0.98 | |
| 138_A | 156_A | 1.184 | 0.98 | |
| 115_A | 156_A | 1.179 | 0.98 | |
| 181_N | 187_S | 1.163 | 0.97 | |
| 27_Q | 85_S | 1.153 | 0.97 | |
| 103_A | 107_A | 1.139 | 0.97 | |
| 77_R | 80_L | 1.138 | 0.97 | |
| 104_D | 208_T | 1.129 | 0.97 | |
| 188_V | 201_L | 1.127 | 0.97 | |
| 77_R | 81_L | 1.115 | 0.96 | |
| 28_I | 32_I | 1.11 | 0.96 | |
| 114_L | 134_F | 1.106 | 0.96 | |
| 10_L | 114_L | 1.106 | 0.96 | |
| 76_Y | 80_L | 1.105 | 0.96 | |
| 73_Q | 77_R | 1.104 | 0.96 | |
| 105_L | 110_I | 1.1 | 0.96 | |
| 121_A | 139_D | 1.096 | 0.96 | |
| 151_E | 155_A | 1.087 | 0.96 | |
| 11_D | 17_T | 1.084 | 0.96 | |
| 116_S | 139_D | 1.076 | 0.95 | |
| 23_Q | 27_Q | 1.075 | 0.95 | |
| 122_P | 126_A | 1.068 | 0.95 | |
| 100_S | 103_A | 1.064 | 0.95 | |
| 169_G | 185_M | 1.06 | 0.95 | |
| 3_L | 168_I | 1.058 | 0.95 | |
| 153_F | 171_E | 1.055 | 0.95 | |
| 5_G | 111_S | 1.049 | 0.94 | |
| 144_K | 151_E | 1.049 | 0.94 | |
| 94_V | 99_R | 1.038 | 0.94 | |
| 23_Q | 26_Q | 1.02 | 0.93 | |
| 175_A | 178_D | 1.011 | 0.93 | |
| 7_I | 160_L | 1.007 | 0.93 | |
| 136_F | 160_L | 1.005 | 0.93 | |
| 191_G | 200_L | 1.004 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 4g9bA | 1 | 1 | 100 | 0.24 | Contact Map | 0.8 |
| 3nasA | 2 | 0.9863 | 100 | 0.244 | Contact Map | 0.773 |
| 4gibA | 2 | 0.9909 | 100 | 0.257 | Contact Map | 0.82 |
| 2wf7A | 1 | 0.9863 | 100 | 0.276 | Contact Map | 0.793 |
| 3iruA | 2 | 0.9772 | 100 | 0.279 | Contact Map | 0.742 |
| 4eekA | 1 | 0.9543 | 100 | 0.281 | Contact Map | 0.77 |
| 3qxgA | 2 | 0.9543 | 100 | 0.283 | Contact Map | 0.862 |
| 1swvA | 2 | 0.9772 | 100 | 0.284 | Contact Map | 0.819 |
| 3dv9A | 1 | 0.9635 | 100 | 0.286 | Contact Map | 0.82 |
| 3s6jA | 6 | 0.9726 | 100 | 0.286 | Contact Map | 0.723 |
Sequence Conservation (Image Generated using WebLogo v3)