| UniProt: | P31467 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11725 | ||
| Length: | 221 (211) | ||
| Sequences: | 12878 | ||
| Seq/Len: | 61.03 |
| YIEH
Paralog alert: 0.91 [within 20: 0.22] - ratio of genomes with paralogs Cluster includes: GPH PGMB YFBT YIEH YIGB YIHX YJJG YNIC YQAB YRFG |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 5_E | 161_N | 4.2 | 1.00 | |
| 166_D | 171_G | 3.346 | 1.00 | |
| 150_H | 154_A | 2.841 | 1.00 | |
| 120_G | 125_L | 2.786 | 1.00 | |
| 175_G | 182_V | 2.784 | 1.00 | |
| 140_R | 144_D | 2.613 | 1.00 | |
| 112_N | 116_Q | 2.555 | 1.00 | |
| 98_S | 127_Y | 2.464 | 1.00 | |
| 6_A | 157_V | 2.457 | 1.00 | |
| 108_S | 115_M | 2.421 | 1.00 | |
| 152_A | 162_C | 2.392 | 1.00 | |
| 176_I | 199_V | 2.39 | 1.00 | |
| 150_H | 153_K | 2.35 | 1.00 | |
| 103_P | 129_P | 2.298 | 1.00 | |
| 32_E | 74_V | 2.288 | 1.00 | |
| 94_G | 98_S | 2.235 | 1.00 | |
| 112_N | 137_D | 2.162 | 1.00 | |
| 107_V | 147_L | 2.059 | 1.00 | |
| 172_A | 182_V | 2.032 | 1.00 | |
| 203_T | 207_Q | 2.026 | 1.00 | |
| 173_Q | 177_D | 1.986 | 1.00 | |
| 4_I | 181_E | 1.981 | 1.00 | |
| 101_T | 129_P | 1.949 | 1.00 | |
| 163_I | 183_F | 1.941 | 1.00 | |
| 152_A | 180_M | 1.927 | 1.00 | |
| 9_F | 104_M | 1.888 | 1.00 | |
| 140_R | 146_A | 1.878 | 1.00 | |
| 158_N | 161_N | 1.834 | 1.00 | |
| 8_F | 107_V | 1.784 | 1.00 | |
| 7_V | 102_A | 1.743 | 1.00 | |
| 28_T | 78_E | 1.73 | 1.00 | |
| 93_A | 205_L | 1.707 | 1.00 | |
| 101_T | 127_Y | 1.696 | 1.00 | |
| 104_M | 128_F | 1.692 | 1.00 | |
| 105_C | 130_D | 1.662 | 1.00 | |
| 152_A | 159_V | 1.616 | 1.00 | |
| 164_L | 175_G | 1.596 | 1.00 | |
| 181_E | 199_V | 1.595 | 1.00 | |
| 6_A | 155_M | 1.549 | 1.00 | |
| 7_V | 165_V | 1.54 | 1.00 | |
| 105_C | 155_M | 1.531 | 1.00 | |
| 8_F | 151_A | 1.53 | 1.00 | |
| 157_V | 162_C | 1.499 | 1.00 | |
| 186_C | 203_T | 1.47 | 1.00 | |
| 204_H | 207_Q | 1.462 | 1.00 | |
| 99_A | 209_P | 1.444 | 1.00 | |
| 7_V | 100_I | 1.426 | 1.00 | |
| 92_G | 95_A | 1.425 | 1.00 | |
| 130_D | 154_A | 1.399 | 0.99 | |
| 67_A | 70_E | 1.391 | 0.99 | |
| 11_C | 16_V | 1.389 | 0.99 | |
| 183_F | 202_F | 1.365 | 0.99 | |
| 162_C | 180_M | 1.348 | 0.99 | |
| 116_Q | 125_L | 1.327 | 0.99 | |
| 169_V | 173_Q | 1.314 | 0.99 | |
| 8_F | 164_L | 1.312 | 0.99 | |
| 53_E | 56_D | 1.299 | 0.99 | |
| 14_T | 165_V | 1.294 | 0.99 | |
| 6_A | 162_C | 1.292 | 0.99 | |
| 11_C | 115_M | 1.284 | 0.99 | |
| 130_D | 133_F | 1.281 | 0.99 | |
| 32_E | 78_E | 1.278 | 0.99 | |
| 15_L | 93_A | 1.258 | 0.99 | |
| 33_F | 74_V | 1.238 | 0.98 | |
| 145_P | 149_F | 1.215 | 0.98 | |
| 8_F | 162_C | 1.21 | 0.98 | |
| 200_T | 211_L | 1.205 | 0.98 | |
| 28_T | 32_E | 1.201 | 0.98 | |
| 183_F | 200_T | 1.192 | 0.98 | |
| 148_M | 180_M | 1.187 | 0.98 | |
| 106_V | 128_F | 1.181 | 0.98 | |
| 116_Q | 120_G | 1.175 | 0.98 | |
| 148_M | 164_L | 1.165 | 0.97 | |
| 11_C | 106_V | 1.161 | 0.97 | |
| 73_H | 77_A | 1.153 | 0.97 | |
| 78_E | 81_R | 1.153 | 0.97 | |
| 95_A | 206_S | 1.139 | 0.97 | |
| 96_L | 205_L | 1.132 | 0.97 | |
| 176_I | 182_V | 1.128 | 0.97 | |
| 89_A | 124_M | 1.126 | 0.97 | |
| 101_T | 104_M | 1.125 | 0.97 | |
| 12_D | 18_S | 1.123 | 0.97 | |
| 96_L | 209_P | 1.112 | 0.96 | |
| 28_T | 82_L | 1.105 | 0.96 | |
| 4_I | 163_I | 1.101 | 0.96 | |
| 107_V | 151_A | 1.096 | 0.96 | |
| 148_M | 166_D | 1.094 | 0.96 | |
| 146_A | 150_H | 1.091 | 0.96 | |
| 24_R | 28_T | 1.073 | 0.95 | |
| 95_A | 98_S | 1.059 | 0.95 | |
| 186_C | 201_T | 1.051 | 0.94 | |
| 133_F | 154_A | 1.05 | 0.94 | |
| 6_A | 103_P | 1.037 | 0.94 | |
| 202_F | 208_L | 1.034 | 0.94 | |
| 74_V | 77_A | 1.032 | 0.94 | |
| 56_D | 60_L | 1.032 | 0.94 | |
| 133_F | 151_A | 1.031 | 0.94 | |
| 29_M | 33_F | 1.03 | 0.94 | |
| 89_A | 94_G | 1.027 | 0.94 | |
| 174_S | 178_A | 1.025 | 0.93 | |
| 164_L | 180_M | 1.024 | 0.93 | |
| 24_R | 82_L | 1.023 | 0.93 | |
| 149_F | 153_K | 1.019 | 0.93 | |
| 90_I | 187_A | 1.011 | 0.93 | |
| 74_V | 78_E | 1.007 | 0.93 | |
| 165_V | 183_F | 1.005 | 0.93 | |
| 172_A | 184_Y | 1.002 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 4eekA | 1 | 0.991 | 100 | 0.255 | Contact Map | 0.802 |
| 1te2A | 2 | 0.9729 | 100 | 0.265 | Contact Map | 0.86 |
| 2fdrA | 1 | 0.991 | 100 | 0.267 | Contact Map | 0.76 |
| 3l5kA | 1 | 0.9774 | 100 | 0.274 | Contact Map | 0.765 |
| 3d6jA | 1 | 0.9819 | 100 | 0.281 | Contact Map | 0.863 |
| 1swvA | 2 | 0.991 | 100 | 0.283 | Contact Map | 0.821 |
| 2hi0A | 2 | 0.9593 | 100 | 0.286 | Contact Map | 0.805 |
| 4ex6A | 1 | 0.9729 | 100 | 0.286 | Contact Map | 0.762 |
| 3iruA | 2 | 0.991 | 100 | 0.287 | Contact Map | 0.713 |
| 3qxgA | 2 | 0.9593 | 100 | 0.288 | Contact Map | 0.816 |
Sequence Conservation (Image Generated using WebLogo v3)