| UniProt: | P77475 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG13530 | ||
| Length: | 188 (184) | ||
| Sequences: | 12783 | ||
| Seq/Len: | 69.47 |
| YQAB
Paralog alert: 0.91 [within 20: 0.23] - ratio of genomes with paralogs Cluster includes: GPH PGMB YFBT YIEH YIGB YIHX YJJG YNIC YQAB YRFG |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 6_A | 161_Q | 4.018 | 1.00 | |
| 166_E | 171_G | 3.436 | 1.00 | |
| 175_A | 182_A | 2.83 | 1.00 | |
| 150_L | 154_R | 2.749 | 1.00 | |
| 121_A | 126_R | 2.712 | 1.00 | |
| 140_H | 144_A | 2.562 | 1.00 | |
| 113_S | 117_E | 2.401 | 1.00 | |
| 7_G | 157_V | 2.371 | 1.00 | |
| 97_K | 128_Y | 2.348 | 1.00 | |
| 152_A | 162_C | 2.278 | 1.00 | |
| 104_P | 130_D | 2.239 | 1.00 | |
| 150_L | 153_Q | 2.225 | 1.00 | |
| 33_H | 74_E | 2.222 | 1.00 | |
| 172_I | 182_A | 2.177 | 1.00 | |
| 5_Y | 181_D | 2.173 | 1.00 | |
| 93_V | 97_K | 2.163 | 1.00 | |
| 109_T | 116_A | 2.148 | 1.00 | |
| 113_S | 137_H | 2.086 | 1.00 | |
| 173_Q | 177_A | 2.005 | 1.00 | |
| 108_G | 147_T | 1.959 | 1.00 | |
| 100_H | 130_D | 1.954 | 1.00 | |
| 163_V | 183_V | 1.926 | 1.00 | |
| 10_F | 105_M | 1.924 | 1.00 | |
| 106_A | 131_A | 1.909 | 1.00 | |
| 152_A | 180_M | 1.908 | 1.00 | |
| 140_H | 146_D | 1.869 | 1.00 | |
| 158_Q | 161_Q | 1.832 | 1.00 | |
| 131_A | 154_R | 1.801 | 1.00 | |
| 39_D | 42_A | 1.676 | 1.00 | |
| 9_I | 108_G | 1.67 | 1.00 | |
| 8_L | 103_R | 1.651 | 1.00 | |
| 100_H | 128_Y | 1.646 | 1.00 | |
| 164_V | 175_A | 1.616 | 1.00 | |
| 29_E | 78_A | 1.58 | 1.00 | |
| 105_M | 129_F | 1.562 | 1.00 | |
| 152_A | 159_P | 1.558 | 1.00 | |
| 7_G | 155_M | 1.522 | 1.00 | |
| 8_L | 165_F | 1.476 | 1.00 | |
| 157_V | 162_C | 1.452 | 1.00 | |
| 9_I | 151_C | 1.436 | 1.00 | |
| 8_L | 99_W | 1.419 | 1.00 | |
| 98_S | 102_R | 1.4 | 0.99 | |
| 91_P | 94_D | 1.373 | 0.99 | |
| 15_T | 165_F | 1.368 | 0.99 | |
| 106_A | 155_M | 1.363 | 0.99 | |
| 53_R | 56_Q | 1.355 | 0.99 | |
| 12_M | 17_L | 1.352 | 0.99 | |
| 169_D | 173_Q | 1.345 | 0.99 | |
| 67_D | 70_A | 1.31 | 0.99 | |
| 117_E | 126_R | 1.305 | 0.99 | |
| 16_I | 92_L | 1.293 | 0.99 | |
| 9_I | 164_V | 1.286 | 0.99 | |
| 7_G | 162_C | 1.277 | 0.99 | |
| 12_M | 116_A | 1.268 | 0.99 | |
| 162_C | 180_M | 1.252 | 0.99 | |
| 133_V | 154_R | 1.245 | 0.98 | |
| 78_A | 81_S | 1.24 | 0.98 | |
| 9_I | 162_C | 1.239 | 0.98 | |
| 145_P | 149_L | 1.224 | 0.98 | |
| 29_E | 33_H | 1.21 | 0.98 | |
| 133_V | 151_C | 1.189 | 0.98 | |
| 176_R | 182_A | 1.181 | 0.98 | |
| 73_R | 77_E | 1.181 | 0.98 | |
| 148_F | 164_V | 1.178 | 0.98 | |
| 116_A | 134_A | 1.163 | 0.97 | |
| 98_S | 101_G | 1.161 | 0.97 | |
| 34_Y | 74_E | 1.142 | 0.97 | |
| 12_M | 107_V | 1.14 | 0.97 | |
| 172_I | 184_D | 1.132 | 0.97 | |
| 107_V | 129_F | 1.123 | 0.97 | |
| 148_F | 166_E | 1.108 | 0.96 | |
| 88_E | 125_L | 1.108 | 0.96 | |
| 100_H | 105_M | 1.106 | 0.96 | |
| 146_D | 150_L | 1.098 | 0.96 | |
| 25_K | 29_E | 1.091 | 0.96 | |
| 94_D | 97_K | 1.087 | 0.96 | |
| 5_Y | 163_V | 1.081 | 0.95 | |
| 13_D | 19_T | 1.081 | 0.95 | |
| 148_F | 180_M | 1.072 | 0.95 | |
| 174_A | 178_A | 1.057 | 0.95 | |
| 75_K | 79_V | 1.056 | 0.95 | |
| 7_G | 104_P | 1.053 | 0.95 | |
| 74_E | 78_A | 1.053 | 0.95 | |
| 97_K | 101_G | 1.041 | 0.94 | |
| 109_T | 134_A | 1.041 | 0.94 | |
| 117_E | 121_A | 1.035 | 0.94 | |
| 30_V | 34_Y | 1.022 | 0.93 | |
| 25_K | 28_R | 1.015 | 0.93 | |
| 74_E | 77_E | 1.013 | 0.93 | |
| 108_G | 151_C | 1.012 | 0.93 | |
| 164_V | 180_M | 1.007 | 0.93 | |
| 165_F | 183_V | 1.002 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3l5kA | 1 | 1 | 100 | 0.21 | Contact Map | 0.794 |
| 4eekA | 1 | 0.9947 | 100 | 0.221 | Contact Map | 0.794 |
| 3s6jA | 6 | 1 | 100 | 0.221 | Contact Map | 0.7 |
| 3iruA | 2 | 1 | 100 | 0.23 | Contact Map | 0.683 |
| 4g9bA | 1 | 0.9894 | 100 | 0.231 | Contact Map | 0.788 |
| 1te2A | 2 | 1 | 100 | 0.233 | Contact Map | 0.881 |
| 1swvA | 2 | 1 | 100 | 0.235 | Contact Map | 0.801 |
| 3nasA | 2 | 0.9734 | 100 | 0.235 | Contact Map | 0.78 |
| 3qxgA | 2 | 0.9894 | 100 | 0.237 | Contact Map | 0.832 |
| 3ed5A | 1 | 0.9787 | 100 | 0.24 | Contact Map | 0.799 |
Sequence Conservation (Image Generated using WebLogo v3)