| UniProt: | P0A8Y1 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12115 | ||
| Length: | 225 (221) | ||
| Sequences: | 12624 | ||
| Seq/Len: | 57.12 |
| YJJG
Paralog alert: 0.93 [within 20: 0.24] - ratio of genomes with paralogs Cluster includes: GPH PGMB YFBT YIEH YIGB YIHX YJJG YNIC YQAB YRFG |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 4_D | 170_R | 4.346 | 1.00 | |
| 175_G | 181_D | 3.195 | 1.00 | |
| 158_Y | 162_Q | 3.006 | 1.00 | |
| 185_G | 192_T | 2.917 | 1.00 | |
| 129_E | 134_R | 2.825 | 1.00 | |
| 148_V | 152_N | 2.675 | 1.00 | |
| 105_N | 136_Y | 2.573 | 1.00 | |
| 112_K | 138_D | 2.566 | 1.00 | |
| 121_S | 125_Q | 2.563 | 1.00 | |
| 160_L | 171_V | 2.465 | 1.00 | |
| 186_I | 209_T | 2.444 | 1.00 | |
| 158_Y | 161_E | 2.427 | 1.00 | |
| 117_T | 124_Q | 2.377 | 1.00 | |
| 101_V | 105_N | 2.372 | 1.00 | |
| 5_W | 166_P | 2.36 | 1.00 | |
| 108_R | 138_D | 2.227 | 1.00 | |
| 121_S | 145_E | 2.213 | 1.00 | |
| 114_G | 139_L | 2.136 | 1.00 | |
| 213_S | 217_E | 2.121 | 1.00 | |
| 160_L | 190_L | 2.067 | 1.00 | |
| 116_I | 155_I | 2.065 | 1.00 | |
| 172_L | 193_C | 2.007 | 1.00 | |
| 182_I | 192_T | 2 | 1.00 | |
| 3_W | 191_A | 2 | 1.00 | |
| 139_L | 162_Q | 1.996 | 1.00 | |
| 183_L | 187_N | 1.97 | 1.00 | |
| 148_V | 154_K | 1.956 | 1.00 | |
| 167_D | 170_R | 1.945 | 1.00 | |
| 8_F | 113_I | 1.932 | 1.00 | |
| 7_F | 116_I | 1.886 | 1.00 | |
| 191_A | 209_T | 1.868 | 1.00 | |
| 6_I | 111_A | 1.831 | 1.00 | |
| 160_L | 168_R | 1.816 | 1.00 | |
| 113_I | 137_F | 1.805 | 1.00 | |
| 108_R | 136_Y | 1.754 | 1.00 | |
| 100_A | 215_L | 1.71 | 1.00 | |
| 29_D | 85_A | 1.63 | 1.00 | |
| 5_W | 163_A | 1.623 | 1.00 | |
| 173_M | 185_G | 1.607 | 1.00 | |
| 7_F | 159_A | 1.583 | 1.00 | |
| 166_P | 171_V | 1.582 | 1.00 | |
| 6_I | 174_V | 1.568 | 1.00 | |
| 196_N | 213_S | 1.558 | 1.00 | |
| 106_A | 219_E | 1.556 | 1.00 | |
| 6_I | 107_I | 1.552 | 1.00 | |
| 114_G | 163_A | 1.527 | 1.00 | |
| 214_S | 217_E | 1.526 | 1.00 | |
| 193_C | 212_V | 1.462 | 1.00 | |
| 7_F | 173_M | 1.443 | 1.00 | |
| 10_A | 15_F | 1.44 | 1.00 | |
| 99_G | 102_S | 1.42 | 1.00 | |
| 35_T | 38_D | 1.413 | 1.00 | |
| 171_V | 190_L | 1.391 | 0.99 | |
| 141_V | 159_A | 1.388 | 0.99 | |
| 25_R | 29_D | 1.387 | 0.99 | |
| 141_V | 162_Q | 1.381 | 0.99 | |
| 13_T | 174_V | 1.339 | 0.99 | |
| 25_R | 85_A | 1.323 | 0.99 | |
| 10_A | 115_I | 1.321 | 0.99 | |
| 125_Q | 134_R | 1.303 | 0.99 | |
| 103_L | 219_E | 1.291 | 0.99 | |
| 5_W | 171_V | 1.285 | 0.99 | |
| 115_I | 137_F | 1.284 | 0.99 | |
| 106_A | 109_G | 1.28 | 0.99 | |
| 14_L | 100_A | 1.278 | 0.99 | |
| 153_K | 157_D | 1.261 | 0.99 | |
| 7_F | 171_V | 1.247 | 0.99 | |
| 59_T | 62_Q | 1.244 | 0.98 | |
| 193_C | 210_W | 1.232 | 0.98 | |
| 210_W | 221_L | 1.21 | 0.98 | |
| 186_I | 192_T | 1.202 | 0.98 | |
| 96_P | 133_L | 1.193 | 0.98 | |
| 103_L | 215_L | 1.192 | 0.98 | |
| 83_N | 87_I | 1.188 | 0.98 | |
| 105_N | 109_G | 1.183 | 0.98 | |
| 125_Q | 129_E | 1.183 | 0.98 | |
| 102_S | 216_H | 1.168 | 0.97 | |
| 139_L | 163_A | 1.163 | 0.97 | |
| 10_A | 124_Q | 1.162 | 0.97 | |
| 26_M | 30_Y | 1.152 | 0.97 | |
| 117_T | 142_I | 1.151 | 0.97 | |
| 5_W | 112_K | 1.15 | 0.97 | |
| 156_F | 190_L | 1.146 | 0.97 | |
| 121_S | 142_I | 1.131 | 0.97 | |
| 97_L | 197_A | 1.125 | 0.97 | |
| 196_N | 211_T | 1.124 | 0.97 | |
| 156_F | 173_M | 1.122 | 0.97 | |
| 96_P | 101_V | 1.113 | 0.96 | |
| 212_V | 218_L | 1.112 | 0.96 | |
| 124_Q | 142_I | 1.106 | 0.96 | |
| 156_F | 175_G | 1.099 | 0.96 | |
| 107_I | 111_A | 1.093 | 0.96 | |
| 147_G | 154_K | 1.093 | 0.96 | |
| 25_R | 89_A | 1.09 | 0.96 | |
| 116_I | 159_A | 1.089 | 0.96 | |
| 85_A | 89_A | 1.087 | 0.96 | |
| 102_S | 105_N | 1.086 | 0.96 | |
| 174_V | 193_C | 1.082 | 0.96 | |
| 25_R | 28_L | 1.071 | 0.95 | |
| 182_I | 194_W | 1.067 | 0.95 | |
| 3_W | 172_L | 1.061 | 0.95 | |
| 157_D | 161_E | 1.059 | 0.95 | |
| 154_K | 158_Y | 1.057 | 0.95 | |
| 85_A | 88_N | 1.056 | 0.95 | |
| 108_R | 113_I | 1.054 | 0.95 | |
| 173_M | 190_L | 1.047 | 0.94 | |
| 178_A | 183_L | 1.045 | 0.94 | |
| 132_G | 135_D | 1.045 | 0.94 | |
| 184_G | 188_A | 1.043 | 0.94 | |
| 104_L | 136_Y | 1.012 | 0.93 | |
| 180_S | 183_L | 1.003 | 0.93 | |
| 11_D | 17_F | 1.002 | 0.92 | |
| 81_K | 85_A | 1.001 | 0.92 | |
| 157_D | 188_A | 1 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3qnmA | 1 | 0.9911 | 100 | 0.224 | Contact Map | 0.849 |
| 3ed5A | 1 | 1 | 100 | 0.225 | Contact Map | 0.787 |
| 4eekA | 1 | 0.9111 | 100 | 0.258 | Contact Map | 0.776 |
| 1swvA | 2 | 0.9556 | 100 | 0.267 | Contact Map | 0.83 |
| 2om6A | 2 | 0.9778 | 100 | 0.267 | Contact Map | 0.845 |
| 3smvA | 1 | 0.9733 | 100 | 0.274 | Contact Map | 0.7 |
| 3umcA | 4 | 0.9778 | 100 | 0.274 | Contact Map | 0.809 |
| 2hdoA | 1 | 0.8844 | 100 | 0.275 | Contact Map | 0.842 |
| 3umbA | 1 | 0.9778 | 100 | 0.278 | Contact Map | 0.793 |
| 3iruA | 2 | 0.9556 | 100 | 0.279 | Contact Map | 0.725 |
Sequence Conservation (Image Generated using WebLogo v3)